RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 MTCL1Q9Y4B5 1905 aaKnown RBP15.72■□□□□ 0.11
SNRNP25-203ENST00000397876 K7ERI5 159 aa15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 AOC1P19801 751 aa15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 NAB2Q15742 525 aa15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 NT5DC1Q5TFE4 455 aa15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 KRT79Q5XKE5 535 aa15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 CWF19L1Q69YN2 538 aaKnown RBP15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 SIX5Q8N196 739 aa15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 NXPE3Q969Y0 559 aa15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 POLD4Q9HCU8 107 aa15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 DNM3Q9UQ16 869 aa15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 PCDHB6Q9Y5E3 794 aa15.71■□□□□ 0.11
SNRNP25-203ENST00000397876 CCDC169A6NNP5 214 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 TMEM189-UBE2V1I3L0A0 370 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 NARSO43776 548 aaKnown RBP15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 ST18O60284 1047 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 GFRA3O60609 400 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 HNRNPA1P09651 372 aaKnown RBP eCLIP15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 RFX1P22670 979 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 YARSP54577 528 aaKnown RBP15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 DMP1Q13316 513 aaPredicted RBP15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 GLRA4Q5JXX5 417 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 PPM1LQ5SGD2 360 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 LNX1Q8TBB1 728 aaPredicted RBP15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 RSAD2Q8WXG1 361 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 DRC1Q96MC2 740 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 UROC1Q96N76 676 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 KIF2CQ99661 725 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 CLSTN3Q9BQT9 956 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 CXCL16Q9H2A7 254 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 TOPORSQ9NS56 1045 aaPredicted RBP15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 TNFSF13BQ9Y275 285 aa15.7■□□□□ 0.1
SNRNP25-203ENST00000397876 E9PMD0 336 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 B3GAT3O94766 335 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 C8AP07357 584 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 CFHP08603 1231 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 SRFP11831 508 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 LAMP2P13473 410 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 PRPHP41219 470 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 NPTX2P47972 431 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 TOB1P50616 345 aaPredicted RBP15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 PEX3P56589 373 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 ZNF568Q3ZCX4 644 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 DTHD1Q6ZMT9 781 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 PPP1R10Q96QC0 940 aaKnown RBP15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 RTP3Q9BQQ7 232 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 CCDC94Q9BW85 323 aaPredicted RBP15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 MRPL4Q9BYD3 311 aaKnown RBP15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 WNT16Q9UBV4 365 aa15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 ZFP37Q9Y6Q3 630 aaPredicted RBP15.69■□□□□ 0.1
SNRNP25-203ENST00000397876 DOCK8Q8NF50 2099 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 PP2D1A8MPX8 630 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 TRAPPC3O43617 180 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 HIP1RO75146 1068 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 XYLBO75191 536 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 NPR3P17342 541 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 FSHRP23945 695 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 HOXA9P31269 272 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 GRM5P41594 1212 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 DCLRE1AQ6PJP8 1040 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 SLC44A3Q8N4M1 653 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 ACO2Q99798 780 aaKnown RBP15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 CDT1Q9H211 546 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 TMEM134Q9H6X4 195 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 KMT5AQ9NQR1 393 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 VWA8A3KMH1 1905 aa15.68■□□□□ 0.1
SNRNP25-203ENST00000397876 ZFHX2Q9C0A1 2572 aaPredicted RBP15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 PROB1E7EW31 1015 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 STK25O00506 426 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 FGFR3P22607 806 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 OR1D2P34982 312 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 CLCNKBP51801 687 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 HTR4Q13639 388 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 RAB33AQ14088 237 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 RABEP1Q15276 862 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 C8orf34Q49A92 452 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 RILPL1Q5EBL4 403 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 MCTP1Q6DN14 999 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 GRASPQ7Z6J2 395 aaPredicted RBP15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 CCDC105Q8IYK2 499 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 DAW1Q8N136 415 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 CEP120Q8N960 986 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 SLC7A14Q8TBB6 771 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 RUSC1Q9BVN2 902 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 TIPINQ9BVW5 301 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 C17orf75Q9HAS0 396 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 GOLGA2P5Q9HBQ8 144 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 SLC38A7Q9NVC3 462 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 ARHGAP28Q9P2N2 729 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 MTRRQ9UBK8 725 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 CA14Q9ULX7 337 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 POLIQ9UNA4 740 aa15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 RBM19Q9Y4C8 960 aaKnown RBP15.67■□□□□ 0.1
SNRNP25-203ENST00000397876 SMIM28A0A1B0GU29 152 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 ANHXE9PGG2 379 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 CCL16O15467 120 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 ADAM12O43184 909 aa15.66■□□□□ 0.1
SNRNP25-203ENST00000397876 PI15O43692 258 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms