RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 EIF3CLB5ME19 914 aaKnown RBP8.84□□□□□ -0.99
PTPRD-204ENST00000397606 CYP26A1O43174 497 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 SEPT4O43236 478 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 SART1O43290 800 aaKnown RBP8.84□□□□□ -0.99
PTPRD-204ENST00000397606 PRPSAP2O60256 369 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 AKAP3O75969 853 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 MMP3P08254 477 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 CASP4P49662 377 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
PTPRD-204ENST00000397606 PTPROQ16827 1216 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 SLC35G1Q2M3R5 365 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 ANO5Q75V66 913 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 PASD1Q8IV76 773 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 PDLIM2Q96JY6 352 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 EIF3CQ99613 913 aaKnown RBP8.84□□□□□ -0.99
PTPRD-204ENST00000397606 FUCA2Q9BTY2 467 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 TXNRD2Q9NNW7 524 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 DPP3Q9NY33 737 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 SSU72P8A0A1W2PR75 194 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 OR1G1P47890 313 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 CYP24A1Q07973 514 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 ARID5BQ14865 1188 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 ARL13BQ3SXY8 428 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 CCDC25Q86WR0 208 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 WDR49Q8IV35 697 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 DYDC1Q8WWB3 177 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 RSAD2Q8WXG1 361 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 DNAJC19Q96DA6 116 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 CPB2Q96IY4 423 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 AGPAT1Q99943 283 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 C11orf70Q9BRQ4 267 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 TRIM62Q9BVG3 475 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 RAB17Q9H0T7 212 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 PCDHB2Q9Y5E7 798 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 MYH13Q9UKX3 1938 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 TNRC6CQ9HCJ0 1690 aaKnown RBP8.84□□□□□ -0.99
PTPRD-204ENST00000397606 CSPG5O95196 566 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 ITGB3P05106 788 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 RAG1P15918 1043 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 EIF4BP23588 611 aaKnown RBP8.84□□□□□ -0.99
PTPRD-204ENST00000397606 ARL4AP40617 200 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 SEZ6Q53EL9 994 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 KLHDC7AQ5VTJ3 777 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 MTHFD1LQ6UB35 978 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 GLYCTKQ8IVS8 523 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 ELMOD1Q8N336 334 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 RBBP8NLQ8NC74 664 aaPredicted RBP8.84□□□□□ -0.99
PTPRD-204ENST00000397606 NT5C1AQ9BXI3 368 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 ASB7Q9H672 318 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 AAASQ9NRG9 546 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 RNF14Q9UBS8 474 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 COL5A3P25940 1745 aaPredicted RBP8.84□□□□□ -0.99
PTPRD-204ENST00000397606 BCORQ6W2J9 1755 aa8.84□□□□□ -0.99
PTPRD-204ENST00000397606 GHRP10912 638 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 GLRA2P23416 452 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 GFPT1Q06210 699 aaPredicted RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 CDKAL1Q5VV42 579 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 TSNARE1Q96NA8 513 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 TMEM39AQ9NV64 488 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 KLK14Q9P0G3 267 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 FHOD1Q9Y613 1164 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 UBR3Q6ZT12 1888 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 BRWD3Q6RI45 1802 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 M0R2N6 131 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 AOC2O75106 756 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 CSDE1O75534 798 aaKnown RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 FTLP02792 175 aaPredicted RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 PSMA2P25787 234 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 ADORA2BP29275 332 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 GTF2BQ00403 316 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 PRKCZQ05513 592 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 UGCGQ16739 394 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 NAA35Q5VZE5 725 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 RNF10Q8N5U6 811 aaKnown RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 COLEC11Q9BWP8 271 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 CREBZFQ9NS37 354 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 TXNDC16Q9P2K2 825 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 STAP1Q9ULZ2 295 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 MOCS3O95396 460 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 THP07101 528 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 PSMC1P62191 440 aaKnown RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 VEPH1Q14D04 833 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 FAM117BQ6P1L5 589 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 OTUD6BQ8N6M0 293 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 ASAP3Q8TDY4 903 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 PPP2R3CQ969Q6 453 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 SENP6Q9GZR1 1112 aaPredicted RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 ANAPC7Q9UJX3 599 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 LY75O60449 1722 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 RPTORQ8N122 1335 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 GTPBP10A4D1E9 387 aaKnown RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 GPR25O00155 361 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 HSPA6P17066 643 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 ALDH7A1P49419 539 aaKnown RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 TERF1P54274 439 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 TRIM59Q8IWR1 403 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 DCP1BQ8IZD4 617 aaKnown RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 SYN2Q92777 582 aaPredicted RBP8.83□□□□□ -1
PTPRD-204ENST00000397606 RUNDC3BQ96NL0 473 aa8.83□□□□□ -1
PTPRD-204ENST00000397606 MTMR12Q9C0I1 747 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms