RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 COG5Q9UP83 839 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 MYH11P35749 1972 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 EMSYQ7Z589 1322 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 YDJCA8MPS7 323 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 FOXO6A8MYZ6 492 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 H0YIN7 160 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 NFIBO00712 420 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 PENKP01210 267 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 CYP3A4P08684 503 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 ALAS1P13196 640 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 EIF2AK2P19525 551 aaKnown RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 SP100P23497 879 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 ECHS1P30084 290 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 SOX5P35711 763 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 KCNJ1P48048 391 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 NT5C2P49902 561 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 NPEPPSP55786 919 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 MARSP56192 900 aaKnown RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 ZRSR2Q15696 482 aaKnown RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 UAP1Q16222 522 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 KRT71Q3SY84 523 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 Q4G0T1 1027 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 CEP55Q53EZ4 464 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 DCAF12L1Q5VU92 463 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 PLA2G4FQ68DD2 849 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 LMBRD2Q68DH5 695 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 LLGL2Q6P1M3 1020 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 TATDN1Q6P1N9 297 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 C1orf186Q6ZWK4 172 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 EPM2AIP1Q7L775 607 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 ZNF720Q7Z2F6 126 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 PIGWQ7Z7B1 504 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 NT5DC3Q86UY8 548 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 ARHGEF19Q8IW93 802 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 RNF168Q8IYW5 571 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 SDR16C5Q8N3Y7 309 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 LRRC57Q8N9N7 239 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 SLC30A5Q8TAD4 765 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 KRT35Q92764 455 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 SYN2Q92777 582 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 C18orf8Q96DM3 657 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 FAM20AQ96MK3 541 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 SYT15Q9BQS2 421 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.37□□□□□ -1.552e-18■■□□□ 12.7
SSR1-202ENST00000397511 EDEM3Q9BZQ6 932 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 GPBP1L1Q9HC44 474 aaPredicted RBP5.37□□□□□ -1.55
SSR1-202ENST00000397511 ARHGEF10LQ9HCE6 1279 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 AGPAT3Q9NRZ7 376 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 CTNNAL1Q9UBT7 734 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 SCOCQ9UIL1 159 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 AMFRQ9UKV5 643 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 TMCO1Q9UM00 188 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 AGAP1Q9UPQ3 857 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 SCN9AQ15858 1988 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 NHSQ6T4R5 1651 aa5.37□□□□□ -1.55
SSR1-202ENST00000397511 CCDC169A6NNP5 214 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 H0YGN5 161 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 PITPNM1O00562 1244 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 SLC16A4O15374 487 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 UBOX5O94941 541 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 FTLP02792 175 aaPredicted RBP5.36□□□□□ -1.55
SSR1-202ENST00000397511 SHBGP04278 402 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 MMEP08473 750 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 KRT16P08779 473 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 RARAP10276 462 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 DLATP10515 647 aaKnown RBP5.36□□□□□ -1.55
SSR1-202ENST00000397511 VPS41P49754 854 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 TUBP50607 506 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 PEX3P56589 373 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 COPS2P61201 443 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 MYL7Q01449 175 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 PPP3CAQ08209 521 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 CUL1Q13616 776 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 TRIP13Q15645 432 aaPredicted RBP5.36□□□□□ -1.55
SSR1-202ENST00000397511 STRIP1Q5VSL9 837 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 DPY19L2Q6NUT2 758 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 ARMCX6Q7L4S7 300 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 ALG3Q92685 438 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 RAB3IPQ96QF0 476 aaPredicted RBP5.36□□□□□ -1.55
SSR1-202ENST00000397511 RPS6KC1Q96S38 1066 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 ELAC2Q9BQ52 826 aaKnown RBP5.36□□□□□ -1.55
SSR1-202ENST00000397511 MAF1Q9H063 256 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 INTS2Q9H0H0 1204 aaKnown RBP5.36□□□□□ -1.55
SSR1-202ENST00000397511 ZNF277Q9NRM2 450 aaPredicted RBP5.36□□□□□ -1.55
SSR1-202ENST00000397511 GALNT8Q9NY28 637 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 DLGAP2Q9P1A6 1054 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 TRPC5Q9UL62 973 aaPredicted RBP5.36□□□□□ -1.55
SSR1-202ENST00000397511 NFS1Q9Y697 457 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 TCRBV7S2A1N4TA0A589 114 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 CYP26A1O43174 497 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 PSMD10O75832 226 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 ACADSP16219 412 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 ITGB5P18084 799 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 GJC1P36383 396 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 RFC5P40937 340 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 RAD23BP54727 409 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 LMNB2Q03252 620 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 FAM182AQ5T1J6 154 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 RNF220Q5VTB9 566 aa5.36□□□□□ -1.55
SSR1-202ENST00000397511 IRGCQ6NXR0 463 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms