RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ZNF720Q7Z2F6 126 aa25.63■■□□□ 1.69
CSNK1E-203ENST00000396832 VSIG1Q86XK7 387 aa25.63■■□□□ 1.69
CSNK1E-203ENST00000396832 TMEM237Q96Q45 408 aa25.63■■□□□ 1.69
CSNK1E-203ENST00000396832 FIZ1Q96SL8 496 aa25.63■■□□□ 1.69
CSNK1E-203ENST00000396832 PCDHB18PQ96TA0 734 aa25.63■■□□□ 1.69
CSNK1E-203ENST00000396832 CYP39A1Q9NYL5 469 aa25.63■■□□□ 1.69
CSNK1E-203ENST00000396832 ZBTB21Q9ULJ3 1066 aa25.63■■□□□ 1.69
CSNK1E-203ENST00000396832 PASKQ96RG2 1323 aa25.63■■□□□ 1.69
CSNK1E-203ENST00000396832 MIF4GDA9UHW6 222 aaKnown RBP25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 ATP6V1C1P21283 382 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 JAG1P78504 1218 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 NBPF20Q3BBV1 942 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 MAGEB18Q96M61 343 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 FAM20AQ96MK3 541 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 PITPNM3Q9BZ71 974 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 ZC3H12CQ9C0D7 883 aaKnown RBP25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 GOLGA8IPA6NC78 632 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 GOLGA8JA6NMD2 632 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 E7ENQ6 273 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 GM2AP17900 193 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 MRPS35P82673 323 aaKnown RBP25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 PPP3CAQ08209 521 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 VPS72Q15906 364 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 CWF19L1Q69YN2 538 aaKnown RBP25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 INTS8Q75QN2 995 aaKnown RBP25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 SYT15Q9BQS2 421 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 LRMDAQ9H2I8 198 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 AAASQ9NRG9 546 aa25.62■■□□□ 1.69
CSNK1E-203ENST00000396832 UTRNP46939 3433 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 K7ENM7 598 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 ACVR2BQ13705 512 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 TEKT1Q969V4 418 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 NUDCD1Q96RS6 583 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 CBWD1Q9BRT8 395 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 BTAF1O14981 1849 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 CLDN3O15551 220 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 C2CD6Q53TS8 623 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 FAM47EQ6ZV65 393 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 FAM13CQ8NE31 585 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 GLT8D2Q9H1C3 349 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 LRRC4BQ9NT99 713 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 HAO1Q9UJM8 370 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 MAP3K13O43283 966 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 TARSP26639 723 aaKnown RBP25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 CHKAP35790 457 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 PEX5P50542 639 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 CRY2Q49AN0 593 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 SYDE2Q5VT97 1194 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 OTOP1Q7RTM1 612 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 SLC47A2Q86VL8 602 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 RHOT2Q8IXI1 618 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 TEKT4Q8WW24 435 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 ERP27Q96DN0 273 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 HSD17B14Q9BPX1 270 aa25.61■■□□□ 1.69
CSNK1E-203ENST00000396832 GAS7O60861 476 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 GAP43P17677 238 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 ARHGEF18Q6ZSZ5 1173 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 CYP4X1Q8N118 509 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 AGGF1Q8N302 714 aaeCLIP25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 PPM1KQ8N3J5 372 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 TBX3O15119 743 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 CYP26A1O43174 497 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 GGPS1O95749 300 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 TAC1P20366 129 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 SETDB1Q15047 1291 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 ZYXQ15942 572 aaKnown RBP25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 MFN1Q8IWA4 741 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 GRAMD1AQ96CP6 724 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 NKIRAS1Q9NYS0 192 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 MTUS1Q9ULD2 1270 aa25.6■■□□□ 1.69
CSNK1E-203ENST00000396832 TMEM150BA6NC51 233 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 ATP5HO75947 161 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 FOXN2P32314 431 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 DCAF4Q8WV16 495 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 POLR3CQ9BUI4 534 aaPredicted RBP25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 NUP85Q9BW27 656 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 PIDD1Q9HB75 910 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 ASIC3Q9UHC3 531 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 IGLV3-22A0A075B6J6 115 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 H0Y3Z8 333 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 PPEF1O14829 653 aaPredicted RBP25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 EIF3DO15371 548 aaKnown RBP eCLIP25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 C11orf63Q6NUN7 778 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 MOXD1Q6UVY6 613 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 MIGA2Q7L4E1 593 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 SH3BP5LQ7L8J4 393 aa25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 NOP9Q86U38 636 aaKnown RBP25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 ZNF219Q9P2Y4 722 aaPredicted RBP25.59■■□□□ 1.69
CSNK1E-203ENST00000396832 NPTXRO95502 500 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 CRKP46108 304 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 GPC5P78333 572 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 ROR2Q01974 943 aaKnown RBP25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 CYP1B1Q16678 543 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 KYNUQ16719 465 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 EPC2Q52LR7 807 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 TMEM154Q6P9G4 183 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 RNF207Q6ZRF8 634 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 LMO3Q8TAP4 145 aa25.58■■□□□ 1.69
CSNK1E-203ENST00000396832 ABLIM1O14639 778 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms