RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CROCCP2Q86T23 111 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 FAM13CQ8NE31 585 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 ART4Q93070 314 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 ZNF653Q96CK0 615 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 SYT15Q9BQS2 421 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 PAPOLBQ9NRJ5 636 aaKnown RBP10.51□□□□□ -0.73
TRIM39-203ENST00000396547 APEX2Q9UBZ4 518 aa10.51□□□□□ -0.73
TRIM39-203ENST00000396547 BBOX1O75936 387 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 SNUPNO95149 360 aaKnown RBP10.5□□□□□ -0.73
TRIM39-203ENST00000396547 OAS1P00973 400 aaKnown RBP10.5□□□□□ -0.73
TRIM39-203ENST00000396547 SPATA31C1P0DKV0 1188 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 DRG2P55039 364 aaKnown RBP10.5□□□□□ -0.73
TRIM39-203ENST00000396547 ARHGAP4P98171 946 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 SHROOM1Q2M3G4 852 aaPredicted RBP10.5□□□□□ -0.73
TRIM39-203ENST00000396547 QRICH1Q2TAL8 776 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 MFSD14BQ5SR56 506 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 ARHGEF18Q6ZSZ5 1173 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 GSTA5Q7RTV2 222 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 ARHGEF19Q8IW93 802 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 PPM1KQ8N3J5 372 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 SYT2Q8N9I0 419 aaPredicted RBP10.5□□□□□ -0.73
TRIM39-203ENST00000396547 ZNF526Q8TF50 670 aaPredicted RBP10.5□□□□□ -0.73
TRIM39-203ENST00000396547 UCMAQ8WVF2 138 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 RBM17Q96I25 401 aaKnown RBP10.5□□□□□ -0.73
TRIM39-203ENST00000396547 KCNQ5Q9NR82 932 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 AAASQ9NRG9 546 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 ZBTB5O15062 677 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 CYP26A1O43174 497 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 TAC1P20366 129 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 CALB2P22676 271 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 SSTR3P32745 418 aaPredicted RBP10.5□□□□□ -0.73
TRIM39-203ENST00000396547 IL9RQ01113 521 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 ZNF543Q08ER8 600 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 OVGP1Q12889 678 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 RHOT2Q8IXI1 618 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 RTKN2Q8IZC4 609 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 ANKLE1Q8NAG6 615 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 TBC1D10AQ9BXI6 508 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 CCDC134Q9H6E4 229 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 RNPEPL1Q9HAU8 725 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 TXLNGQ9NUQ3 528 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 PCYOX1Q9UHG3 505 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 NENFQ9UMX5 172 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 SUGT1Q9Y2Z0 365 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 MYO3BQ8WXR4 1341 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 PITPNM2Q9BZ72 1349 aa10.5□□□□□ -0.73
TRIM39-203ENST00000396547 GOLGA8IPA6NC78 632 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 GOLGA8JA6NMD2 632 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 EML1O00423 815 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 GJB6O95452 261 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 TTLL1O95922 423 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 ATP5DP30049 168 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 PTDSS1P48651 473 aaKnown RBP10.49□□□□□ -0.73
TRIM39-203ENST00000396547 PAPOLAP51003 745 aaKnown RBP10.49□□□□□ -0.73
TRIM39-203ENST00000396547 STRN3Q13033 797 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 ODR4Q5SWX8 454 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 LLGL2Q6P1M3 1020 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 ASRGL1Q7L266 308 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 FAM178BQ8IXR5 827 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 ZNF564Q8TBZ8 553 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-203ENST00000396547 SLC5A5Q92911 643 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 SERPINB12Q96P63 405 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 PCDHB18PQ96TA0 734 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 PHTF1Q9UMS5 762 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 NCANO14594 1321 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 EMSYQ7Z589 1322 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 MIF4GDA9UHW6 222 aaKnown RBP10.49□□□□□ -0.73
TRIM39-203ENST00000396547 DDX39AO00148 427 aaKnown RBP10.49□□□□□ -0.73
TRIM39-203ENST00000396547 PEX11AO75192 247 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 TTC4O95801 387 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 ATF2P15336 505 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 NBPF20Q3BBV1 942 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 SPDYCQ5MJ68 293 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 TRMT10CQ7L0Y3 403 aaKnown RBP10.49□□□□□ -0.73
TRIM39-203ENST00000396547 CEP120Q8N960 986 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 DNAJC9Q8WXX5 260 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 ROPN1BQ9BZX4 212 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-203ENST00000396547 GPR88Q9GZN0 384 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 C12orf65Q9H3J6 166 aaKnown RBP10.49□□□□□ -0.73
TRIM39-203ENST00000396547 ROPN1Q9HAT0 212 aaPredicted RBP10.49□□□□□ -0.73
TRIM39-203ENST00000396547 CHKBQ9Y259 395 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 USTQ9Y2C2 406 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 C2CD2Q9Y426 696 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 FAM86B1E9PN63 330 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 RIMBP2O15034 1052 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 FAM86B2P0C5J1 330 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 BCRP11274 1271 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 CTNNA2P26232 953 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 PEX5P50542 639 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 RWDD2BP57060 319 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 RINT1Q6NUQ1 792 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 RFWD3Q6PCD5 774 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 SP8Q8IXZ3 490 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 STK32AQ8WU08 396 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 CCDC127Q96BQ5 260 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 FAM84AQ96KN4 292 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 EIF2AK1Q9BQI3 630 aaKnown RBP10.49□□□□□ -0.73
TRIM39-203ENST00000396547 NPHS2Q9NP85 383 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 IRAK4Q9NWZ3 460 aa10.49□□□□□ -0.73
TRIM39-203ENST00000396547 NINJ2Q9NZG7 142 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms