RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 GRIN3BO60391 1043 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 TCEAL1Q15170 157 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 PTPROQ16827 1216 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 C11orf63Q6NUN7 778 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 SND1Q7KZF4 910 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNX6-202ENST00000396526 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.34■□□□□ 0.371e-6■■■■■ 50.8
SNX6-202ENST00000396526 ZNF653Q96CK0 615 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 PRDM10Q9NQV6 1147 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 GTF3C4Q9UKN8 822 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 STXBP5LQ9Y2K9 1186 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 PRKCBP05771 671 aa17.33■□□□□ 0.37
SNX6-202ENST00000396526 TNFRSF8P28908 595 aa17.33■□□□□ 0.37
SNX6-202ENST00000396526 LAMTOR4Q0VGL1 99 aa17.33■□□□□ 0.37
SNX6-202ENST00000396526 FAM71BQ8TC56 605 aa17.33■□□□□ 0.37
SNX6-202ENST00000396526 ZBTB45Q96K62 511 aaPredicted RBP17.33■□□□□ 0.37
SNX6-202ENST00000396526 EPB41L5Q9HCM4 733 aa17.33■□□□□ 0.37
SNX6-202ENST00000396526 NOC2LQ9Y3T9 749 aaKnown RBP17.33■□□□□ 0.37
SNX6-202ENST00000396526 WDR90Q96KV7 1748 aa17.33■□□□□ 0.36
SNX6-202ENST00000396526 ARIH2O95376 493 aa17.33■□□□□ 0.36
SNX6-202ENST00000396526 GUCY2DQ02846 1103 aa17.33■□□□□ 0.36
SNX6-202ENST00000396526 TERF2Q15554 542 aa17.33■□□□□ 0.36
SNX6-202ENST00000396526 C15orf39Q6ZRI6 1047 aa17.33■□□□□ 0.36
SNX6-202ENST00000396526 ZNF771Q7L3S4 317 aaPredicted RBP17.33■□□□□ 0.36
SNX6-202ENST00000396526 ARHGEF26Q96DR7 871 aa17.33■□□□□ 0.36
SNX6-202ENST00000396526 RPS6KC1Q96S38 1066 aa17.33■□□□□ 0.36
SNX6-202ENST00000396526 PI4K2AQ9BTU6 479 aa17.33■□□□□ 0.36
SNX6-202ENST00000396526 ALG6Q9Y672 507 aa17.33■□□□□ 0.36
SNX6-202ENST00000396526 PTPRFP10586 1907 aa17.33■□□□□ 0.36
SNX6-202ENST00000396526 C4BPAP04003 597 aaKnown RBP17.32■□□□□ 0.36
SNX6-202ENST00000396526 MMEP08473 750 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 HSPA6P17066 643 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 ACAD10Q6JQN1 1059 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 EFCC1Q9HA90 598 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 SLC45A1Q9Y2W3 748 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 OGTO15294 1046 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 PLCB4Q15147 1175 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 LMBRD2Q68DH5 695 aaPredicted RBP17.32■□□□□ 0.36
SNX6-202ENST00000396526 CCDC62Q6P9F0 684 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 TRIM72Q6ZMU5 477 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 PALB2Q86YC2 1186 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 RHPN2Q8IUC4 686 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 IFT81Q8WYA0 676 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 SLITRK6Q9H5Y7 841 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 VTA1Q9NP79 307 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 SPOPO43791 374 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 GH1P01241 217 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 FMO1Q01740 532 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 MOGSQ13724 837 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 ARMCX2Q7L311 632 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 RASGEF1CQ8N431 466 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 HDAC7Q8WUI4 952 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 UBXN6Q9BZV1 441 aa17.32■□□□□ 0.36
SNX6-202ENST00000396526 TTC7AQ9ULT0 858 aaPredicted RBP17.32■□□□□ 0.36
SNX6-202ENST00000396526 TMEM110-MUSTN1A8MSY1 372 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 INO80B-WBP1J3KQ70 363 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 SOCS7O14512 581 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 CYP2C8P10632 490 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 TMOD1P28289 359 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 NNTQ13423 1086 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 TRPC3Q13507 836 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 MESDQ14696 234 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 ZNF484Q5JVG2 852 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 BRSK2Q8IWQ3 736 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 FAM212AQ96EL1 285 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 INO80BQ9C086 356 aaPredicted RBP17.31■□□□□ 0.36
SNX6-202ENST00000396526 WNT8AQ9H1J5 351 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 PCDHB4Q9Y5E5 795 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 CCL15-CCL14A0A0B4J2E2 113 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 PDHXO00330 501 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 MAGEB2O15479 319 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 MYBL1P10243 752 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 CHRNB2P17787 502 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 FKBP1BP68106 108 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 GRM1Q13255 1194 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 CCL15Q16663 113 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 SEL1L2Q5TEA6 688 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 LIN9Q5TKA1 542 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 ZBTB33Q86T24 672 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 TRIM50Q86XT4 487 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 LRRC71Q8N4P6 559 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 ZNF564Q8TBZ8 553 aaPredicted RBP17.31■□□□□ 0.36
SNX6-202ENST00000396526 AENQ8WTP8 325 aaKnown RBP17.31■□□□□ 0.36
SNX6-202ENST00000396526 NSFP46459 744 aaKnown RBP17.31■□□□□ 0.36
SNX6-202ENST00000396526 CUL2Q13617 745 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 NCOA4Q13772 614 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 HLTFQ14527 1009 aaKnown RBP eCLIP17.31■□□□□ 0.36
SNX6-202ENST00000396526 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 TDRD10Q5VZ19 366 aaKnown RBP17.31■□□□□ 0.36
SNX6-202ENST00000396526 DPP9Q86TI2 863 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 WDR49Q8IV35 697 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 ABRAQ8N0Z2 381 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 ZNF516Q92618 1163 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 PCDHB18PQ96TA0 734 aa17.31■□□□□ 0.36
SNX6-202ENST00000396526 GOLGA6BA6NDN3 693 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 HSF2BPO75031 334 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 MTA2O94776 668 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 FGGP02679 453 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 EFCAB12Q6NXP0 572 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 NLRP4Q96MN2 994 aa17.3■□□□□ 0.36
SNX6-202ENST00000396526 HINFPQ9BQA5 517 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms