RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 TRPM4Q8TD43 1214 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 PRCCQ92733 491 aaPredicted RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 STK33Q9BYT3 514 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 RAB17Q9H0T7 212 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 DEFB129Q9H1M3 183 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 C10orf88Q9H8K7 445 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 AGO4Q9HCK5 861 aaKnown RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 ABCF3Q9NUQ8 709 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 ANAPC7Q9UJX3 599 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 ZHX2Q9Y6X8 837 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 TRAPPC3O43617 180 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 SPAG7O75391 227 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 JAM2P57087 298 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 BIRC3Q13489 604 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 DPH6Q7L8W6 267 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 NOP9Q86U38 636 aaKnown RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 UBL4BQ8N7F7 174 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 PRELID2Q8N945 189 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 ATP8B4Q8TF62 1192 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 HES6Q96HZ4 224 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 XPO6Q96QU8 1125 aaKnown RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 RPAP3Q9H6T3 665 aaPredicted RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 SUCLA2Q9P2R7 463 aaPredicted RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 SLC12A6Q9UHW9 1150 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 CTDP1Q9Y5B0 961 aaPredicted RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 WDR91A4D1P6 747 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 TCP11X1B4DZS4 312 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 RASGRF2O14827 1237 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 IFNB1P01574 187 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 MYBL1P10243 752 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 BCRP11274 1271 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 CD58P19256 250 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 ADCY8P40145 1251 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 SCTRP47872 440 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 VAMP7P51809 220 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 PLCB3Q01970 1234 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 CETN1Q12798 172 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 SMAD1Q15797 465 aaKnown RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 SGO2Q562F6 1265 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 ZNF564Q8TBZ8 553 aaPredicted RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 N4BP2L2Q92802 583 aaPredicted RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 CHMP6Q96FZ7 201 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 KIAA1683Q9H0B3 1180 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 CHST7Q9NS84 486 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 SAMD15Q9P1V8 674 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 NENFQ9UMX5 172 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 TRPC6Q9Y210 931 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 UBIAD1Q9Y5Z9 338 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 POLR2AP24928 1970 aaKnown RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 SBF1O95248 1867 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 A8MUI8 341 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 POC1B-GALNT4F8VUJ3 575 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 CCDC188H7C350 402 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 DDX3YO15523 660 aaKnown RBP9.94□□□□□ -0.82
NDE1-201ENST00000396354 RGS20O76081 388 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 ATF7P17544 494 aaPredicted RBP9.94□□□□□ -0.82
NDE1-201ENST00000396354 CHKAP35790 457 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 FSTL1Q12841 308 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 MTMR3Q13615 1198 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 PGM5Q15124 567 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 C1orf220Q5T0J3 134 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 SMYD5Q6GMV2 418 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 CYB5D1Q6P9G0 228 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 PRPF38AQ8NAV1 312 aaKnown RBP9.94□□□□□ -0.82
NDE1-201ENST00000396354 TATDN2Q93075 761 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 TEKT3Q9BXF9 490 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 R3HDMLQ9H3Y0 253 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 FAM114A2Q9NRY5 505 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 RNF181Q9P0P0 153 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 TMEM59LQ9UK28 342 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 CEP83Q9Y592 693 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.94□□□□□ -0.82
NDE1-201ENST00000396354 WDR46O15213 610 aaKnown RBP9.94□□□□□ -0.82
NDE1-201ENST00000396354 RARAP10276 462 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 NAA25Q14CX7 972 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 CCDC197Q8NCU1 140 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 TAS1R2Q8TE23 839 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 VPS33BQ9H267 617 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 ALG13Q9NP73 1137 aaKnown RBP9.94□□□□□ -0.82
NDE1-201ENST00000396354 DMAC2Q9NW81 257 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 HSPBP1Q9NZL4 362 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 MTRF1LQ9UGC7 380 aaKnown RBP9.94□□□□□ -0.82
NDE1-201ENST00000396354 CNOT7Q9UIV1 285 aaKnown RBP9.94□□□□□ -0.82
NDE1-201ENST00000396354 RASAL2Q9UJF2 1139 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 FNTAP49354 379 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 DYNLT1P63172 113 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 KRT17Q04695 432 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 ANKRD20A8PQ5CZ79 823 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 RNF207Q6ZRF8 634 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 REPS2Q8NFH8 660 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 POMGNT1Q8WZA1 660 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 SEMA4DQ92854 862 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 NACC1Q96RE7 527 aa9.94□□□□□ -0.82
NDE1-201ENST00000396354 VWA5AO00534 786 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 KIAA0391O15091 583 aaKnown RBP9.93□□□□□ -0.82
NDE1-201ENST00000396354 THAP12O43422 761 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 ADRB2P07550 413 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 TMEM253P0C7T8 217 aa9.93□□□□□ -0.82
NDE1-201ENST00000396354 ZBTB48P10074 688 aaPredicted RBP9.93□□□□□ -0.82
NDE1-201ENST00000396354 GBP2P32456 591 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms