RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 DEFB123Q8N688 67 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 SAAL1Q96ER3 474 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 ZNF558Q96NG5 402 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 FAM213AQ9BRX8 229 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 PLVAPQ9BX97 442 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 KCTD10Q9H3F6 313 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 PLEKHA5Q9HAU0 1116 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 HSPBP1Q9NZL4 362 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 PLAGL2Q9UPG8 496 aa20.91■□□□□ 0.94
HOXA9-202ENST00000396345 MYO9BQ13459 2157 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 SMIM28A0A1B0GU29 152 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 GOLGA8IPA6NC78 632 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 GOLGA8JA6NMD2 632 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 C5orf67F2Z3F1 127 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 BIN1O00499 593 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 PDXKO00764 312 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 MEFVO15553 781 aaPredicted RBP20.9■□□□□ 0.94
HOXA9-202ENST00000396345 EXTL3O43909 919 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 ALDH7A1P49419 539 aaKnown RBP20.9■□□□□ 0.94
HOXA9-202ENST00000396345 BCAR1P56945 870 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 PPP2R3AQ06190 1150 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 MORC3Q14149 939 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 GLRA4Q5JXX5 417 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 KCNT2Q6UVM3 1135 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 GPD1LQ8N335 351 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 ZSWIM2Q8NEG5 633 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 NOC3LQ8WTT2 800 aaKnown RBP20.9■□□□□ 0.94
HOXA9-202ENST00000396345 CNTN3Q9P232 1028 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 DNAJB4Q9UDY4 337 aa20.9■□□□□ 0.94
HOXA9-202ENST00000396345 TTC26A0AVF1 554 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 CARNS1A5YM72 827 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 EPOPA6NHQ4 379 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 LACTBL1A8MY62 500 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 B4GALT3O60512 393 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 KCNE1P15382 129 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 PBX3P40426 434 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 PRCPP42785 496 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 POU5F1Q01860 360 aaKnown RBP20.89■□□□□ 0.93
HOXA9-202ENST00000396345 DSC1Q08554 894 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 COBLL1Q53SF7 1204 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 CRELD2Q6UXH1 353 aaPredicted RBP20.89■□□□□ 0.93
HOXA9-202ENST00000396345 C12orf56Q8IXR9 622 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 COLGALT2Q8IYK4 626 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 FAM212AQ96EL1 285 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 PPP1R10Q96QC0 940 aaKnown RBP20.89■□□□□ 0.93
HOXA9-202ENST00000396345 TMEM175Q9BSA9 504 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 PRDM12Q9H4Q4 367 aa20.89■□□□□ 0.93
HOXA9-202ENST00000396345 CALUO43852 315 aaPredicted RBP20.88■□□□□ 0.93
HOXA9-202ENST00000396345 ALDH2P05091 517 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 ADRB2P07550 413 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 GALTP07902 379 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 SLC11A1P49279 550 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 CYP2J2P51589 502 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 TUSC3Q13454 348 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 GPM6BQ13491 265 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 CD302Q8IX05 232 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 KLHL23Q8NBE8 558 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 P2RX5Q93086 422 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 ZMAT2Q96NC0 199 aaKnown RBP20.88■□□□□ 0.93
HOXA9-202ENST00000396345 C11orf84Q9BUA3 381 aaPredicted RBP20.88■□□□□ 0.93
HOXA9-202ENST00000396345 KIAA1586Q9HCI6 787 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 SLC38A7Q9NVC3 462 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 CHD7Q9P2D1 2997 aa20.88■□□□□ 0.93
HOXA9-202ENST00000396345 NT5C1B-RDH14C9J2C7 533 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 H3BNC9 293 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 RFXAPO00287 272 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 BMP6P22004 513 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 PPM1AP35813 382 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 OR1G1P47890 313 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 STIM1Q13586 685 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 HSP90AA2PQ14568 343 aaPredicted RBP20.87■□□□□ 0.93
HOXA9-202ENST00000396345 NAB2Q15742 525 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 ADSSL1Q8N142 457 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 SLC39A11Q8N1S5 342 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 TRIML1Q8N9V2 468 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 XXYLT1Q8NBI6 393 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 GDPD5Q8WTR4 605 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 SPG21Q9NZD8 308 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 TRAF3IP3Q9Y228 551 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 FAN1Q9Y2M0 1017 aa20.87■□□□□ 0.93
HOXA9-202ENST00000396345 PDCD11Q14690 1871 aaKnown RBP20.86■□□□□ 0.93
HOXA9-202ENST00000396345 ZNF233A6NK53 670 aa20.86■□□□□ 0.93
HOXA9-202ENST00000396345 TULP1O00294 542 aaPredicted RBP20.86■□□□□ 0.93
HOXA9-202ENST00000396345 IL18RAPO95256 599 aa20.86■□□□□ 0.93
HOXA9-202ENST00000396345 SPAG1Q07617 926 aa20.86■□□□□ 0.93
HOXA9-202ENST00000396345 BRSK2Q8IWQ3 736 aa20.86■□□□□ 0.93
HOXA9-202ENST00000396345 KIF12Q96FN5 646 aa20.86■□□□□ 0.93
HOXA9-202ENST00000396345 FBXL18Q96ME1 805 aa20.86■□□□□ 0.93
HOXA9-202ENST00000396345 TSPAN18Q96SJ8 248 aa20.86■□□□□ 0.93
HOXA9-202ENST00000396345 ASB7Q9H672 318 aa20.86■□□□□ 0.93
HOXA9-202ENST00000396345 RBAKQ9NYW8 714 aaPredicted RBP20.86■□□□□ 0.93
HOXA9-202ENST00000396345 PRG3Q9Y2Y8 225 aaPredicted RBP20.86■□□□□ 0.93
HOXA9-202ENST00000396345 CASTOR2A6NHX0 329 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 NRP1O14786 923 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 EXOC3O60645 756 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 FGF18O76093 207 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 NR3C1P04150 777 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 ITGB1P05556 798 aa20.85■□□□□ 0.93
HOXA9-202ENST00000396345 CD44P16070 742 aaKnown RBP20.85■□□□□ 0.93
HOXA9-202ENST00000396345 PTMSP20962 102 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms