RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 ZDHHC7Q9NXF8 308 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 THEGQ9P2T0 379 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 ANGEL1Q9UNK9 670 aaKnown RBP10.29□□□□□ -0.76
CDRT1-204ENST00000395906 TMA7Q9Y2S6 64 aaKnown RBP10.29□□□□□ -0.76
CDRT1-204ENST00000395906 FPGT-TNNI3KV9GXZ4 949 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 FAM196BA6NMK8 535 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 EYA2O00167 538 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 PDE8AO60658 829 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 PARNO95453 639 aaKnown RBP10.29□□□□□ -0.76
CDRT1-204ENST00000395906 CBX6O95503 412 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 CSF1RP07333 972 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 UBL4AP11441 157 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 MXI1P50539 228 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 CDC16Q13042 620 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 AUHQ13825 339 aaKnown RBP10.29□□□□□ -0.76
CDRT1-204ENST00000395906 ANKDD1AQ495B1 522 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 KCTD21Q4G0X4 260 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 NEK10Q6ZWH5 1172 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 VASH1Q7L8A9 365 aaPredicted RBP10.29□□□□□ -0.76
CDRT1-204ENST00000395906 PRPF18Q99633 342 aaKnown RBP10.29□□□□□ -0.76
CDRT1-204ENST00000395906 MIPEPQ99797 713 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 PITPNM3Q9BZ71 974 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 NT5C3AQ9H0P0 336 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 ZNF652Q9Y2D9 606 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 WASF2Q9Y6W5 498 aa10.29□□□□□ -0.76
CDRT1-204ENST00000395906 A0A087X0B3 334 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 TTLL13PA6NNM8 815 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 RASGRF2O14827 1237 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 CCDC22O60826 627 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 CNOT3O75175 753 aaKnown RBP10.28□□□□□ -0.76
CDRT1-204ENST00000395906 PRCPP42785 496 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 KLK7P49862 253 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 TOB1P50616 345 aaPredicted RBP10.28□□□□□ -0.76
CDRT1-204ENST00000395906 ASPHQ12797 758 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 PPP2R5CQ13362 524 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 NFIXQ14938 502 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 RILPL1Q5EBL4 403 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 ZNF658Q5TYW1 1059 aaPredicted RBP10.28□□□□□ -0.76
CDRT1-204ENST00000395906 FYB2Q5VWT5 728 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 PPP2R2DQ66LE6 453 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 ANO5Q75V66 913 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 TMC4Q7Z404 712 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 UBE2Q1Q7Z7E8 422 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 GRAMD2AQ8IUY3 354 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 SIX5Q8N196 739 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 APPBP2Q92624 585 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 SPATA17Q96L03 361 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 RTFDC1Q9BY42 306 aaPredicted RBP10.28□□□□□ -0.76
CDRT1-204ENST00000395906 CRNKL1Q9BZJ0 848 aaKnown RBP10.28□□□□□ -0.76
CDRT1-204ENST00000395906 DDX47Q9H0S4 455 aaKnown RBP10.28□□□□□ -0.76
CDRT1-204ENST00000395906 EBF3Q9H4W6 596 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 VTA1Q9NP79 307 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 UVRAGQ9P2Y5 699 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 DNAJB4Q9UDY4 337 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 DOLKQ9UPQ8 538 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 STARD13Q9Y3M8 1113 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 STK36Q9NRP7 1315 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 UNCXA6NJT0 531 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 NOTOA8MTQ0 251 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 PGRMC1O00264 195 aaKnown RBP10.28□□□□□ -0.76
CDRT1-204ENST00000395906 BBOX1O75936 387 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 CTAG1AP78358 180 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 SLC29A2Q14542 456 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 NAB2Q15742 525 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 SHROOM1Q2M3G4 852 aaPredicted RBP10.28□□□□□ -0.76
CDRT1-204ENST00000395906 METTL24Q5JXM2 366 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 DHRS4L2Q6PKH6 230 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 MYO1HQ8N1T3 1032 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 CCDC82Q8N4S0 544 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 NKX2-3Q8TAU0 364 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 ESR2Q92731 530 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 BTBD10Q9BSF8 475 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 ANKRD2Q9GZV1 360 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 AMACRQ9UHK6 382 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 SATB2Q9UPW6 733 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 TRAF3IP3Q9Y228 551 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 NHSQ6T4R5 1651 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 PITPNM2Q9BZ72 1349 aa10.28□□□□□ -0.76
CDRT1-204ENST00000395906 TMEM114B3SHH9 223 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 KCNK3O14649 394 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 PGM3O95394 542 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 SMIM18P0DKX4 95 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 ANPEPP15144 967 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 GNA11P29992 359 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 STX2P32856 288 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 PPARGP37231 505 aaPredicted RBP10.27□□□□□ -0.76
CDRT1-204ENST00000395906 SLC1A4P43007 532 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 CHN2P52757 468 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 RPL26P61254 145 aaKnown RBP10.27□□□□□ -0.76
CDRT1-204ENST00000395906 SUZ12Q15022 739 aaKnown RBP10.27□□□□□ -0.76
CDRT1-204ENST00000395906 RPS6KA1Q15418 735 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 WDR45BQ5MNZ6 344 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 BORAQ6PGQ7 559 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 MCF2L2Q86YR7 1114 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 EPS8L3Q8TE67 593 aaKnown RBP10.27□□□□□ -0.76
CDRT1-204ENST00000395906 EME1Q96AY2 570 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 ZFRQ96KR1 1074 aaKnown RBP10.27□□□□□ -0.76
CDRT1-204ENST00000395906 ERGIC2Q96RQ1 377 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 TUBGCP2Q9BSJ2 902 aa10.27□□□□□ -0.76
CDRT1-204ENST00000395906 AP1M1Q9BXS5 423 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms