RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 ACAD10Q6JQN1 1059 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 TMC3Q7Z5M5 1100 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 CHST13Q8NET6 341 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 ATP8B4Q8TF62 1192 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 DHX38Q92620 1227 aaKnown RBP12.1□□□□□ -0.47
RAE1-203ENST00000395841 ERP44Q9BS26 406 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 DPH5Q9H2P9 285 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 TMBIM4Q9HC24 238 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 CHORDC1Q9UHD1 332 aaPredicted RBP12.1□□□□□ -0.47
RAE1-203ENST00000395841 STYXL1Q9Y6J8 313 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 PHF2O75151 1096 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 OATP04181 439 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 CTNNA2P26232 953 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 CHRNA3P32297 505 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 CTNNA1P35221 906 aaKnown RBP12.1□□□□□ -0.47
RAE1-203ENST00000395841 COPB2P35606 906 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 FLT3P36888 993 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 CLEC16AQ2KHT3 1053 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 SEL1L2Q5TEA6 688 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 CYFIP1Q7L576 1253 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 PSPC1Q8WXF1 523 aaKnown RBP12.1□□□□□ -0.47
RAE1-203ENST00000395841 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 ZNF302Q9NR11 478 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 C1orf112Q9NSG2 853 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 RASAL2Q9UJF2 1139 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 ARID2Q68CP9 1835 aa12.1□□□□□ -0.47
RAE1-203ENST00000395841 MYZAPP0CAP1 466 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 KRT5P13647 590 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 ATP4AP20648 1035 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 DRG2P55039 364 aaKnown RBP12.09□□□□□ -0.47
RAE1-203ENST00000395841 TTLL12Q14166 644 aaPredicted RBP12.09□□□□□ -0.47
RAE1-203ENST00000395841 SPDYCQ5MJ68 293 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 AADACL2Q6P093 401 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 JAMLQ86YT9 394 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 EFCAB13Q8IY85 973 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 ZNF516Q92618 1163 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 PI4K2AQ9BTU6 479 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 PORCNQ9H237 461 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 PCDHA3Q9Y5H8 950 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 TULP2O00295 520 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 SPOPO43791 374 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 PIGRP01833 764 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 NR1D1P20393 614 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 NAMPTP43490 491 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 SULF1Q8IWU6 871 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 PRELID2Q8N945 189 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.47
RAE1-203ENST00000395841 UBLCP1Q8WVY7 318 aaPredicted RBP12.09□□□□□ -0.47
RAE1-203ENST00000395841 GLG1Q92896 1179 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 TMEM143Q96AN5 459 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 DCPSQ96C86 337 aaKnown RBP12.09□□□□□ -0.47
RAE1-203ENST00000395841 OTUD5Q96G74 571 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 FNBP1Q96RU3 617 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 FMO2Q99518 471 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 TRIM31Q9BZY9 425 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 DHX33Q9H6R0 707 aaKnown RBP12.09□□□□□ -0.47
RAE1-203ENST00000395841 ZNF408Q9H9D4 720 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 PCYOX1Q9UHG3 505 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 RSPH14Q9UHP6 348 aa12.09□□□□□ -0.47
RAE1-203ENST00000395841 AGO2Q9UKV8 859 aaKnown RBP12.09□□□□□ -0.47
RAE1-203ENST00000395841 ERLIN2O94905 339 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 PYGMP11217 842 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 ARL2P36404 184 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 PTGIRP43119 386 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 DHX9Q08211 1270 aaKnown RBP12.08□□□□□ -0.47
RAE1-203ENST00000395841 ZNF844Q08AG5 666 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.47
RAE1-203ENST00000395841 ZACNQ401N2 412 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 WDR44Q5JSH3 913 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 RUFY4Q6ZNE9 571 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 SRLQ86TD4 932 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 ZNF677Q86XU0 584 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 ANKRD35Q8N283 1001 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 ASAP3Q8TDY4 903 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 ZNF526Q8TF50 670 aaPredicted RBP12.08□□□□□ -0.47
RAE1-203ENST00000395841 ELMO3Q96BJ8 720 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 NIFKQ9BYG3 293 aaKnown RBP12.08□□□□□ -0.47
RAE1-203ENST00000395841 ADARB2Q9NS39 739 aaKnown RBP12.08□□□□□ -0.47
RAE1-203ENST00000395841 ZDHHC18Q9NUE0 388 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 CNOT8Q9UFF9 292 aaKnown RBP12.08□□□□□ -0.47
RAE1-203ENST00000395841 SNCAIPQ9Y6H5 919 aa12.08□□□□□ -0.47
RAE1-203ENST00000395841 IGKV6D-21A0A0A0MT36 114 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 PPFIA2O75334 1257 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
RAE1-203ENST00000395841 C4BPAP04003 597 aaKnown RBP12.08□□□□□ -0.48
RAE1-203ENST00000395841 TNNI1P19237 187 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 GLRA2P23416 452 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 ATP1A2P50993 1020 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 BPIFB4P59827 614 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 CNTN2Q02246 1040 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 BIRC3Q13489 604 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 SLFN12LQ6IEE8 588 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 DEPTORQ8TB45 409 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 SLC7A3Q8WY07 619 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 MAGOHBQ96A72 148 aaKnown RBP12.08□□□□□ -0.48
RAE1-203ENST00000395841 C18orf8Q96DM3 657 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 BTBD6Q96KE9 485 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 TXLNGYQ9BZA5 131 aa12.08□□□□□ -0.48
RAE1-203ENST00000395841 MTUS1Q9ULD2 1270 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms