RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 FEM1BQ9UK73 627 aa22.08■■□□□ 1.12
CLK3-202ENST00000395066 TELO2Q9Y4R8 837 aa22.08■■□□□ 1.12
CLK3-202ENST00000395066 RASGRF2O14827 1237 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 P4HA2O15460 535 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 SORBS3O60504 671 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 MFAP3P55082 362 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 FAM160B2Q86V87 743 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 BSNDQ8WZ55 320 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 ART4Q93070 314 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 MTUS1Q9ULD2 1270 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 ATP6V1G2O95670 118 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 CCNE2O96020 404 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 CYP1A2P05177 515 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 ICAM1P05362 532 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 VIMP08670 466 aaKnown RBP22.07■■□□□ 1.12
CLK3-202ENST00000395066 GZMAP12544 262 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 HSPA6P17066 643 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 CNGA1P29973 690 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 PDE6CP51160 858 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 TNIP1Q15025 636 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 C12orf56Q8IXR9 622 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 PARD3BQ8TEW8 1205 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 CDC42EP4Q9H3Q1 356 aaKnown RBP22.07■■□□□ 1.12
CLK3-202ENST00000395066 AAASQ9NRG9 546 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 SYNPO2Q9UMS6 1093 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 SLC12A4Q9UP95 1085 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 CEP83Q9Y592 693 aa22.07■■□□□ 1.12
CLK3-202ENST00000395066 O00370 1275 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 APBA3O96018 575 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 GSTA1P08263 222 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 PTGER2P43116 358 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 RWDD2BP57060 319 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 KRT17Q04695 432 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 KRT39Q6A163 491 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 C7orf43Q8WVR3 580 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 PSPC1Q8WXF1 523 aaKnown RBP22.06■■□□□ 1.12
CLK3-202ENST00000395066 ANAPC7Q9UJX3 599 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 TBX20Q9UMR3 447 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 CD2APQ9Y5K6 639 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 DENND3A2RUS2 1198 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 ECEL1O95672 775 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 NPTX2P47972 431 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 CDR2Q01850 454 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 CLUL1Q15846 466 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 CYP1B1Q16678 543 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 SGO2Q562F6 1265 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 SLC39A4Q6P5W5 647 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 CPA5Q8WXQ8 436 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 DDX1Q92499 740 aaKnown RBP22.06■■□□□ 1.12
CLK3-202ENST00000395066 SAMD15Q9P1V8 674 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 ASIC3Q9UHC3 531 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 GTF3C4Q9UKN8 822 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 PASKQ96RG2 1323 aa22.06■■□□□ 1.12
CLK3-202ENST00000395066 MTA2O94776 668 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 ADCY2Q08462 1091 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 TCEAL1Q15170 157 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 C6orf118Q5T5N4 469 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 STYK1Q6J9G0 422 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 TMEM161BQ8NDZ6 487 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 SYTL5Q8TDW5 730 aaPredicted RBP22.05■■□□□ 1.12
CLK3-202ENST00000395066 NOD2Q9HC29 1040 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 UBIAD1Q9Y5Z9 338 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 TESPA1A2RU30 521 aaPredicted RBP22.05■■□□□ 1.12
CLK3-202ENST00000395066 GRIN3BO60391 1043 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 RARGP13631 454 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 NCKAP1LP55160 1127 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 SP4Q02446 784 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 ADCY1Q08828 1119 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 PRUNE1Q86TP1 453 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 EXOC3L1Q86VI1 746 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 CCDC63Q8NA47 563 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 ATP6V0A4Q9HBG4 840 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 BAIAP2L1Q9UHR4 511 aa22.05■■□□□ 1.12
CLK3-202ENST00000395066 AGTP01019 485 aa22.04■■□□□ 1.12
CLK3-202ENST00000395066 RPS6P62753 249 aaKnown RBP22.04■■□□□ 1.12
CLK3-202ENST00000395066 ALCAMQ13740 583 aa22.04■■□□□ 1.12
CLK3-202ENST00000395066 HEMGNQ9BXL5 484 aa22.04■■□□□ 1.12
CLK3-202ENST00000395066 RAB20Q9NX57 234 aa22.04■■□□□ 1.12
CLK3-202ENST00000395066 MAPTP10636 758 aaKnown RBP22.04■■□□□ 1.12
CLK3-202ENST00000395066 CALCOCO2Q13137 446 aa22.04■■□□□ 1.12
CLK3-202ENST00000395066 RSBN1LQ6PCB5 846 aaPredicted RBP22.04■■□□□ 1.12
CLK3-202ENST00000395066 ANO5Q75V66 913 aa22.04■■□□□ 1.12
CLK3-202ENST00000395066 SV2AQ7L0J3 742 aa22.04■■□□□ 1.12
CLK3-202ENST00000395066 NT5C1BQ96P26 610 aa22.04■■□□□ 1.12
CLK3-202ENST00000395066 PARP2Q9UGN5 583 aa22.04■■□□□ 1.12
CLK3-202ENST00000395066 CNOT7Q9UIV1 285 aaKnown RBP22.04■■□□□ 1.12
CLK3-202ENST00000395066 ADGRA3Q8IWK6 1321 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 GGPS1O95749 300 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 HSPA1LP34931 641 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 FBXL13Q8NEE6 735 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 POMGNT1Q8WZA1 660 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 CCDC134Q9H6E4 229 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 TCEAL9Q9UHQ7 104 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 R3HDM2Q9Y2K5 976 aaKnown RBP22.03■■□□□ 1.12
CLK3-202ENST00000395066 LOXHD1Q8IVV2 1947 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 MAPK4P31152 587 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 FAM133BQ5BKY9 247 aaKnown RBP22.03■■□□□ 1.12
CLK3-202ENST00000395066 CROCCP2Q86T23 111 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 TMEM8AQ9HCN3 771 aa22.03■■□□□ 1.12
CLK3-202ENST00000395066 CFHP08603 1231 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms