RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 USP24Q9UPU5 2620 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 A0A1B0GUA9 196 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 SHISA7A6NL88 538 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 PTGESO14684 152 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 TBX3O15119 743 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 TGM1P22735 817 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 MAGEA9P43362 315 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 PFKPQ01813 784 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 POTEHQ6S545 545 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 TPRG1Q6ZUI0 275 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 CEP57Q86XR8 500 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 FAM177A1Q8N128 213 aaPredicted RBP17.56■□□□□ 0.4
SNCA-205ENST00000394991 SLC7A14Q8TBB6 771 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 ING5Q8WYH8 240 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 LARP6Q9BRS8 491 aaKnown RBP17.56■□□□□ 0.4
SNCA-205ENST00000394991 NFKBIZQ9BYH8 718 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 PARD6AQ9NPB6 346 aa17.56■□□□□ 0.4
SNCA-205ENST00000394991 PRMT8Q9NR22 394 aaPredicted RBP17.56■□□□□ 0.4
SNCA-205ENST00000394991 DNMT3BQ9UBC3 853 aaKnown RBP17.56■□□□□ 0.4
SNCA-205ENST00000394991 CCDC194A0A1B0GVG4 234 aa17.55■□□□□ 0.4
SNCA-205ENST00000394991 CCNT1O60563 726 aaKnown RBP17.55■□□□□ 0.4
SNCA-205ENST00000394991 XYLBO75191 536 aa17.55■□□□□ 0.4
SNCA-205ENST00000394991 SLITRK3O94933 977 aa17.55■□□□□ 0.4
SNCA-205ENST00000394991 POU2F2P09086 479 aa17.55■□□□□ 0.4
SNCA-205ENST00000394991 FZD5Q13467 585 aa17.55■□□□□ 0.4
SNCA-205ENST00000394991 NAB2Q15742 525 aa17.55■□□□□ 0.4
SNCA-205ENST00000394991 EARS2Q5JPH6 523 aaKnown RBP17.55■□□□□ 0.4
SNCA-205ENST00000394991 ZBTB41Q5SVQ8 909 aa17.55■□□□□ 0.4
SNCA-205ENST00000394991 TPH2Q8IWU9 490 aa17.55■□□□□ 0.4
SNCA-205ENST00000394991 GPR161Q8N6U8 529 aaKnown RBP17.55■□□□□ 0.4
SNCA-205ENST00000394991 PLA2G2FQ9BZM2 168 aa17.55■□□□□ 0.4
SNCA-205ENST00000394991 PDCD11Q14690 1871 aaKnown RBP17.54■□□□□ 0.4
SNCA-205ENST00000394991 TTLL13PA6NNM8 815 aa17.54■□□□□ 0.4
SNCA-205ENST00000394991 CPLX1O14810 134 aa17.54■□□□□ 0.4
SNCA-205ENST00000394991 IGFBP6P24592 240 aaPredicted RBP17.54■□□□□ 0.4
SNCA-205ENST00000394991 LMNB2Q03252 620 aa17.54■□□□□ 0.4
SNCA-205ENST00000394991 PABPC1LQ4VXU2 614 aaKnown RBP17.54■□□□□ 0.4
SNCA-205ENST00000394991 AXDND1Q5T1B0 1012 aaPredicted RBP17.54■□□□□ 0.4
SNCA-205ENST00000394991 PIK3AP1Q6ZUJ8 805 aa17.54■□□□□ 0.4
SNCA-205ENST00000394991 OXER1Q8TDS5 423 aa17.54■□□□□ 0.4
SNCA-205ENST00000394991 EIF2AK1Q9BQI3 630 aaKnown RBP17.54■□□□□ 0.4
SNCA-205ENST00000394991 POLR3FQ9H1D9 316 aaPredicted RBP17.54■□□□□ 0.4
SNCA-205ENST00000394991 GJB4Q9NTQ9 266 aa17.54■□□□□ 0.4
SNCA-205ENST00000394991 CDV3Q9UKY7 258 aaKnown RBP17.54■□□□□ 0.4
SNCA-205ENST00000394991 DCDC2BA2VCK2 349 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 FAM205CA6NFA0 338 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 PRR5-ARHGAP8B1AHC4 643 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 DGAT1O75907 488 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 LYPLA2O95372 231 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 SDHBP21912 280 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 PSMA5P28066 241 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 RPS9P46781 194 aaKnown RBP17.53■□□□□ 0.4
SNCA-205ENST00000394991 ARHGAP8P85298 464 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 STK3Q13188 491 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 RAB33AQ14088 237 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 SLC5A9Q2M3M2 681 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 RUFY3Q7L099 469 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 HEBP1Q9NRV9 189 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 KCNH3Q9ULD8 1083 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 USP18Q9UMW8 372 aa17.53■□□□□ 0.4
SNCA-205ENST00000394991 CNOT1A5YKK6 2376 aaKnown RBP17.52■□□□□ 0.4
SNCA-205ENST00000394991 A0A087WWV3 80 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 MARCH6O60337 910 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 DTNBO60941 627 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 ECI2O75521 394 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 TDGF1P13385 188 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 OR1D2P34982 312 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 RARRES1P49788 294 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 MTAPQ13126 283 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 ZNF687Q8N1G0 1237 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 SECISBP2LQ93073 1101 aaKnown RBP17.52■□□□□ 0.4
SNCA-205ENST00000394991 MCRS1Q96EZ8 462 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 ZNF274Q96GC6 653 aaPredicted RBP17.52■□□□□ 0.4
SNCA-205ENST00000394991 HSD17B14Q9BPX1 270 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 ZSWIM6Q9HCJ5 1215 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 GPRC5CQ9NQ84 441 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 ANKEF1Q9NU02 776 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 SNTG2Q9NY99 539 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 MTRRQ9UBK8 725 aa17.52■□□□□ 0.4
SNCA-205ENST00000394991 MRPS23Q9Y3D9 190 aaKnown RBP17.52■□□□□ 0.4
SNCA-205ENST00000394991 LRRIQ4A6NIV6 560 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 TBC1D4O60343 1298 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 USO1O60763 962 aaKnown RBP17.51■□□□□ 0.39
SNCA-205ENST00000394991 RECQL4O94761 1208 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 THP07101 528 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 CEBPBP17676 345 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 FGFR3P22607 806 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 ELAVL2Q12926 359 aaKnown RBP17.51■□□□□ 0.39
SNCA-205ENST00000394991 UVSSAQ2YD98 709 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 TANGO2Q6ICL3 276 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.51■□□□□ 0.39
SNCA-205ENST00000394991 SLFN12Q8IYM2 578 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 NELL2Q99435 816 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 NAP1L4Q99733 375 aaKnown RBP17.51■□□□□ 0.39
SNCA-205ENST00000394991 RTKNQ9BST9 563 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 FZD8Q9H461 694 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 PDZD7Q9H5P4 517 aa17.51■□□□□ 0.39
SNCA-205ENST00000394991 CHD6Q8TD26 2715 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 NRG2O14511 850 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms