RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SF3A1Q15459 793 aaKnown RBP9.74□□□□□ -0.85
ATG4A-205ENST00000394892 SEZ6Q53EL9 994 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 KIAA1841Q6NSI8 718 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 CABP7Q86V35 215 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 LNX1Q8TBB1 728 aaPredicted RBP9.74□□□□□ -0.85
ATG4A-205ENST00000394892 SPIRE2Q8WWL2 714 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 RIN2Q8WYP3 895 aaPredicted RBP9.74□□□□□ -0.85
ATG4A-205ENST00000394892 IFT74Q96LB3 600 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 RIPOR3Q96MK2 946 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 CLSTN3Q9BQT9 956 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 COLEC11Q9BWP8 271 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 TMEM134Q9H6X4 195 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 MAN1C1Q9NR34 630 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 MRPL17Q9NRX2 175 aaKnown RBP9.74□□□□□ -0.85
ATG4A-205ENST00000394892 FAM86C1Q9NVL1 165 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 DZANK1Q9NVP4 752 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 KIF3AQ9Y496 699 aa9.74□□□□□ -0.85
ATG4A-205ENST00000394892 SMIM28A0A1B0GU29 152 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 CARNS1A5YM72 827 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 H0Y858 1186 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 I3L4J1 428 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 TGM5O43548 720 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 URODP06132 367 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 THP07101 528 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 PLS3P13797 630 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 SYT1P21579 422 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 GRM5P41594 1212 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 VCPP55072 806 aaKnown RBP9.73□□□□□ -0.85
ATG4A-205ENST00000394892 OSTNP61366 133 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 MCM6Q14566 821 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 KARSQ15046 597 aaKnown RBP9.73□□□□□ -0.85
ATG4A-205ENST00000394892 DCAF4L1Q3SXM0 396 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 SPECC1Q5M775 1068 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 PALB2Q86YC2 1186 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 GLYCTKQ8IVS8 523 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 CMASQ8NFW8 434 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-205ENST00000394892 EPSTI1Q96J88 318 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 EMILIN2Q9BXX0 1053 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 RAB34Q9BZG1 259 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 IKZF4Q9H2S9 585 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 MFSD1Q9H3U5 465 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 UPF2Q9HAU5 1272 aaKnown RBP9.73□□□□□ -0.85
ATG4A-205ENST00000394892 KMT5AQ9NQR1 393 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 FBXO2Q9UK22 296 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-205ENST00000394892 SORCS3Q9UPU3 1222 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 MTMR6Q9Y217 621 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.73□□□□□ -0.85
ATG4A-205ENST00000394892 STK24Q9Y6E0 443 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 PHLPP2Q6ZVD8 1323 aa9.73□□□□□ -0.85
ATG4A-205ENST00000394892 GALR2O43603 387 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-205ENST00000394892 FAM189A1O60320 539 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 TADA2AO75478 443 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 PLCG1P19174 1290 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 FGFR3P22607 806 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 MARCKSP29966 332 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-205ENST00000394892 MTHFRP42898 656 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 BRCC3P46736 316 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 CLCNKBP51801 687 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 ZNF131P52739 623 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 NCKAP1LP55160 1127 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 DMP1Q13316 513 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-205ENST00000394892 UPP1Q16831 310 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 SLC10A6Q3KNW5 377 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 USP41Q3LFD5 358 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 ATAT1Q5SQI0 421 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 ZBTB41Q5SVQ8 909 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 FAM171A1Q5VUB5 890 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 SLC39A4Q6P5W5 647 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 BRAPQ7Z569 592 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 PPFIBP1Q86W92 1011 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 GPR65Q8IYL9 337 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 HACE1Q8IYU2 909 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 KREMEN2Q8NCW0 462 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 PIK3R5Q8WYR1 880 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 KCNN1Q92952 543 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 C18orf25Q96B23 403 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-205ENST00000394892 DRC1Q96MC2 740 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 CLIC6Q96NY7 704 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 REEP2Q9BRK0 252 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 MRPL4Q9BYD3 311 aaKnown RBP9.72□□□□□ -0.85
ATG4A-205ENST00000394892 SFXN1Q9H9B4 322 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 FNIP2Q9P278 1114 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 LIMD1Q9UGP4 676 aa9.72□□□□□ -0.85
ATG4A-205ENST00000394892 WDFY4Q6ZS81 3184 aa9.71□□□□□ -0.85
ATG4A-205ENST00000394892 ZNF318Q5VUA4 2279 aa9.71□□□□□ -0.85
ATG4A-205ENST00000394892 A0A087X0B3 334 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 CCDC195A0A1B0GUA6 201 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 VPS37CA5D8V6 355 aaPredicted RBP9.71□□□□□ -0.86
ATG4A-205ENST00000394892 TISP43B9A030 160 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 PROB1E7EW31 1015 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 TMEM189-UBE2V1I3L0A0 370 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 NRG2O14511 850 aaPredicted RBP9.71□□□□□ -0.86
ATG4A-205ENST00000394892 TBC1D4O60343 1298 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 GLUD1P00367 558 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 MCF2P10911 925 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 KCNE1P15382 129 aa9.71□□□□□ -0.86
ATG4A-205ENST00000394892 TKTP29401 623 aaKnown RBP9.71□□□□□ -0.86
ATG4A-205ENST00000394892 DHX8Q14562 1220 aaKnown RBP9.71□□□□□ -0.86
ATG4A-205ENST00000394892 TMEM132AQ24JP5 1023 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms