RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 LSM14BQ9BX40 385 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 SEMA6BQ9H3T3 888 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 SIAEQ9HAT2 523 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 EMILIN3Q9NT22 766 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 MKS1Q9NXB0 559 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 ZSWIM5Q9P217 1185 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 MTRF1LQ9UGC7 380 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 STARD13Q9Y3M8 1113 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 ATP6V0A2Q9Y487 856 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 ADAMTS3O15072 1205 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 DEXIO95424 95 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 PEX2P28328 305 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 VCPP55072 806 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 GK3PQ14409 553 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 RRP1BQ14684 758 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 SPDYCQ5MJ68 293 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 OGFOD2Q6N063 350 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 PIK3AP1Q6ZUJ8 805 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 HIPK4Q8NE63 616 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 PANX3Q96QZ0 392 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 POP1Q99575 1024 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 TMEM60Q9H2L4 133 aa13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.3□□□□□ -0.28
SLC28A1-203ENST00000394573 BAZ2BQ9UIF8 2168 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 UQCRBP14927 111 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 KRT2P35908 639 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 PTENP60484 403 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 PLCB3Q01970 1234 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 KYNUQ16719 465 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 DCAF12L1Q5VU92 463 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 SNRNP48Q6IEG0 339 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 EPM2AIP1Q7L775 607 aaPredicted RBP13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 LRRC6Q86X45 466 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 PDSS2Q86YH6 399 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 CPNE9Q8IYJ1 553 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 GALNT4Q8N4A0 578 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 TPCN2Q8NHX9 752 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 PLEKHO2Q8TD55 490 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 COX4I2Q96KJ9 171 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 GCNAQ96QF7 691 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 HEY2Q9UBP5 337 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 K7EPI3 171 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 S100BP04271 92 aaPredicted RBP13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 BCAP31P51572 246 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 ASIC1P78348 528 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 ZBTB16Q05516 673 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 GRM2Q14416 872 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 KRT72Q14CN4 511 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 FASTKD5Q7L8L6 764 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 NLRX1Q86UT6 975 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 POU5F2Q8N7G0 328 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 SENP6Q9GZR1 1112 aaPredicted RBP13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 RBM38Q9H0Z9 239 aaKnown RBP13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 NDUFA13Q9P0J0 144 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 DKK3Q9UBP4 350 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 ASAP1Q9ULH1 1129 aa13.29□□□□□ -0.28
SLC28A1-203ENST00000394573 PLSCR1O15162 318 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 CYP26A1O43174 497 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 BUD23O43709 281 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 FGFR1P11362 822 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 ESRRAP11474 423 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 KCNJ1P48048 391 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 ASPHQ12797 758 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 TMED2Q15363 201 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 UGT2A3Q6UWM9 527 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 RGS9BPQ6ZS82 235 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 TOM1L2Q6ZVM7 507 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 CCDC84Q86UT8 332 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 GLIS3Q8NEA6 775 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 SACM1LQ9NTJ5 587 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 TMOD2Q9NZR1 351 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 A0A1B0GTW7 788 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 H3BRJ5 948 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 CES2O00748 559 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 ZBTB11O95625 1053 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 FGFR1OPO95684 399 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 AP2B1P63010 937 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 ATP2C1P98194 919 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 PTK2Q05397 1052 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 MAPK7Q13164 816 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 SCARF1Q14162 830 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 FXNQ16595 210 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 C1orf146Q5VVC0 180 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 ELMSAN1Q6PJG2 1045 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 ADAMTS13Q76LX8 1427 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 OTOAQ7RTW8 1153 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 BPHLQ86WA6 291 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 ACTRT2Q8TDY3 377 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 PTCD3Q96EY7 689 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 PRPF18Q99633 342 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 GPATCH1Q9BRR8 931 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 SPZ1Q9BXG8 430 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 BHMT2Q9H2M3 363 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms