RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 FOPNLQ96NB1 174 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 DDX47Q9H0S4 455 aaKnown RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 EPC1Q9H2F5 836 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 SMARCAD1Q9H4L7 1026 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 PLEKHA5Q9HAU0 1116 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 TBC1D23Q9NUY8 699 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 STAP1Q9ULZ2 295 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 ATF5Q9Y2D1 282 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 CFAP73A6NFT4 308 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 AIM2O14862 343 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 CIAO1O76071 339 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 BCAR1P56945 870 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 KCNH2Q12809 1159 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 DRAP1Q14919 205 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 MAPRE1Q15691 268 aaKnown RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 PADI6Q6TGC4 694 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 C16orf89Q6UX73 402 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 IFNEQ86WN2 208 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 CHSY1Q86X52 802 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 GIMAP8Q8ND71 665 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.98□□□□□ -1.453e-8■■■■□ 25.1
GAPVD1-206ENST00000394104 MRPS26Q9BYN8 205 aaKnown RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 PARVAQ9NVD7 372 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 LCMT1Q9UIC8 334 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 TOMM70O94826 608 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 APOA4P06727 396 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 RALBP11234 206 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 KCNA3P22001 575 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 MZF1P28698 734 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 CSE1LP55060 971 aaKnown RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 ICE2Q659A1 982 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 UNC13DQ70J99 1090 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 MAP4K1Q92918 833 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 TAF1DQ9H5J8 278 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 NSMCE4AQ9NXX6 385 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 DBR1Q9UK59 544 aaKnown RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 PNMA3Q9UL41 463 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 C16orf96A6NNT2 1141 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 STXBP3O00186 592 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 HIST1H2AGP0C0S8 130 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 PYGMP11217 842 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 HIST1H2ADP20671 130 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 TBXAS1P24557 533 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 NUP62P37198 522 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 PLA2G4AP47712 749 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 CLK1P49759 484 aaKnown RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 HPCAP84074 193 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 PI16Q6UXB8 463 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 KRT77Q7Z794 578 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 IFNLR1Q8IU57 520 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 SCFD1Q8WVM8 642 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 EME1Q96AY2 570 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 HIST1H2AHQ96KK5 128 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 DEPDC7Q96QD5 511 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 RMDN3Q96TC7 470 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 HIST1H2AJQ99878 128 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 H2AFJQ9BTM1 129 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 APOL5Q9BWW9 433 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 ARHGEF38Q9NXL2 777 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 SCN3BQ9NY72 215 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 XPO7Q9UIA9 1087 aaKnown RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 SOX13Q9UN79 622 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 NPHP3-ACAD11A0A0J9YXS1 232 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 KLHL18O94889 574 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 MYBL1P10243 752 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 MYL2P10916 166 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 CDH2P19022 906 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 CACNB3P54284 484 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 DEFA1P59665 94 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 DEFA3P59666 94 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 LAYNQ6UX15 382 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 VN1R5Q7Z5H4 357 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 HEATR4Q86WZ0 1026 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 CCDC60Q8IWA6 550 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 MIER2Q8N344 545 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 ASAP3Q8TDY4 903 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 ATP6V1G3Q96LB4 118 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 TASP1Q9H6P5 420 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 RPAP3Q9H6T3 665 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 ZFYVE1Q9HBF4 777 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 OLFML3Q9NRN5 406 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 PCMTD2Q9NV79 361 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 MAP3K20Q9NYL2 800 aaKnown RBP5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 ADAM21Q9UKJ8 722 aa5.98□□□□□ -1.45
GAPVD1-206ENST00000394104 BLMP54132 1417 aaPredicted RBP5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 MIF4GDA9UHW6 222 aaKnown RBP5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 LARGE1O95461 756 aa5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 RFX3P48380 749 aa5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 TMED10P49755 219 aaKnown RBP5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 RESTQ13127 1097 aa5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 MKRN4PQ13434 485 aaPredicted RBP5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 LONRF1Q17RB8 773 aa5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 CCDC157Q569K6 752 aa5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 IL31Q6EBC2 164 aa5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 CALR3Q96L12 384 aaKnown RBP5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 SPATA33Q96N06 139 aa5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 DDX50Q9BQ39 737 aaKnown RBP5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 THTPAQ9BU02 230 aa5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 MRPL4Q9BYD3 311 aaKnown RBP5.97□□□□□ -1.45
GAPVD1-206ENST00000394104 FAM129AQ9BZQ8 928 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms