RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PRSS55Q6UWB4 352 aaPredicted RBP19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 NOSTRINQ8IVI9 506 aa19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 C4orf32Q8N8J7 132 aa19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 RABGGTAQ92696 567 aa19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 NKD2Q969F2 451 aaPredicted RBP19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 UROC1Q96N76 676 aa19.27■□□□□ 0.68
SNRPA1-202ENST00000394082 RIF1Q5UIP0 2472 aaKnown RBP19.27■□□□□ 0.67
SNRPA1-202ENST00000394082 PHLPP2Q6ZVD8 1323 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 CFHP08603 1231 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 FGFR3P22607 806 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 FSHRP23945 695 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 FOSBP53539 338 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 GUCY1B3Q02153 619 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 RAB33AQ14088 237 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 ANGPT1Q15389 498 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 ZNF174Q15697 407 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 TMEM132AQ24JP5 1023 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 TTC38Q5R3I4 469 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 DCLRE1AQ6PJP8 1040 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 ZSCAN31Q96LW9 406 aaPredicted RBP19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 PPP1R10Q96QC0 940 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 SEMA4AQ9H3S1 761 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 CACNG4Q9UBN1 327 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 CDH7Q9ULB5 785 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 TNFSF13BQ9Y275 285 aa19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 PTPRZ1P23471 2315 aaPredicted RBP19.26■□□□□ 0.67
SNRPA1-202ENST00000394082 XYLBO75191 536 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 EDN1P05305 212 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 MYBP10242 640 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 ATF7IP2Q5U623 682 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 EEF1DP3Q658K8 133 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 GET4Q7L5D6 327 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 CEP57Q86XR8 500 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 GLYCTKQ8IVS8 523 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 IGSF22Q8N9C0 903 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 HASPINQ8TF76 798 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 RAB34Q9BZG1 259 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 BHMT2Q9H2M3 363 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 SH2B1Q9NRF2 756 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 NOL7Q9UMY1 257 aaKnown RBP19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 BACE2Q9Y5Z0 518 aa19.25■□□□□ 0.67
SNRPA1-202ENST00000394082 FAM186AA6NE01 2351 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 LAD1O00515 517 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 TRAPPC3O43617 180 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 C8AP07357 584 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 U2AF2P26368 475 aaKnown RBP eCLIP19.24■□□□□ 0.672e-7■■■□□ 14.8
SNRPA1-202ENST00000394082 CCT6AP40227 531 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 ECM1Q16610 540 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 UPP1Q16831 310 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 XKR4Q5GH76 650 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 PPM1LQ5SGD2 360 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 NT5DC1Q5TFE4 455 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 MTSS1LQ765P7 747 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 GRASPQ7Z6J2 395 aaPredicted RBP19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 FRMD5Q7Z6J6 570 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 CCDC83Q8IWF9 413 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 GPR152Q8TDT2 470 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 TMEM134Q9H6X4 195 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 TBC1D17Q9HA65 648 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 C17orf75Q9HAS0 396 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 MTRRQ9UBK8 725 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 LRWD1Q9UFC0 647 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 KCNH3Q9ULD8 1083 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 NUMBLQ9Y6R0 609 aa19.24■□□□□ 0.67
SNRPA1-202ENST00000394082 K7ERI5 159 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 B3GAT3O94766 335 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 FOXK2Q01167 660 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 ALKAL1Q6UXT8 129 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 ANKS3Q6ZW76 656 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 DDX27Q96GQ7 796 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 CXCL16Q9H2A7 254 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 PTPRHQ9HD43 1115 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 ARHGEF3Q9NR81 526 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 TOPORSQ9NS56 1045 aaPredicted RBP19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 KIAA1024Q9UPX6 916 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 GDAQ9Y2T3 454 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 WDR87Q6ZQQ6 2873 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 VWA8A3KMH1 1905 aa19.23■□□□□ 0.67
SNRPA1-202ENST00000394082 SEC24BO95487 1268 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 GRM5P41594 1212 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 STARD6P59095 220 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 GNL2Q13823 731 aaKnown RBP19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 AXDND1Q5T1B0 1012 aaPredicted RBP19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 KCTD17Q8N5Z5 321 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 FAM184AQ8NB25 1140 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 FGF13Q92913 245 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 SHDQ96IW2 340 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 KIFC3Q9BVG8 833 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 SLC38A7Q9NVC3 462 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 DLGAP2Q9P1A6 1054 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 KCNG1Q9UIX4 513 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 CA14Q9ULX7 337 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 SIT1Q9Y3P8 196 aa19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 RBM19Q9Y4C8 960 aaKnown RBP19.22■□□□□ 0.67
SNRPA1-202ENST00000394082 SMIM28A0A1B0GU29 152 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 STK25O00506 426 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 ADAM12O43184 909 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 RFX1P22670 979 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 OR1D2P34982 312 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms