RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PIGOQ8TEQ8 1089 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 FGF13Q92913 245 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 CCDC43Q96MW1 224 aaKnown RBP17.02■□□□□ 0.32
CHMP3-202ENST00000393773 TTC12Q9H892 705 aaPredicted RBP17.02■□□□□ 0.32
CHMP3-202ENST00000393773 TPCN1Q9ULQ1 816 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 PCDHA12Q9UN75 941 aa17.02■□□□□ 0.32
CHMP3-202ENST00000393773 EPG5Q9HCE0 2579 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 KANSL1LA0AUZ9 987 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 CCL16O15467 120 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 RECQL4O94761 1208 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 EDN1P05305 212 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 PPM1LQ5SGD2 360 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 FAM171A1Q5VUB5 890 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 ITFG1Q8TB96 612 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 SLC7A14Q8TBB6 771 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 RUBCNQ92622 972 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 FZD8Q9H461 694 aa17.01■□□□□ 0.31
CHMP3-202ENST00000393773 ORC3Q9UBD5 711 aaPredicted RBP17.01■□□□□ 0.31
CHMP3-202ENST00000393773 A0A087WWV3 80 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 NEMFO60524 1076 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 FDPSP14324 419 aaKnown RBP17■□□□□ 0.31
CHMP3-202ENST00000393773 SNW1Q13573 536 aaKnown RBP17■□□□□ 0.31
CHMP3-202ENST00000393773 ZNF528Q3MIS6 628 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 DGLUCYQ7Z3D6 616 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 NPAS3Q8IXF0 933 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 DCLK2Q8N568 766 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 BSNDQ8WZ55 320 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 SHDQ96IW2 340 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 MTMR9Q96QG7 549 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 HINFPQ9BQA5 517 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 CCDC113Q9H0I3 377 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 SNTG2Q9NY99 539 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 DLL3Q9NYJ7 618 aa17■□□□□ 0.31
CHMP3-202ENST00000393773 N4BP3O15049 544 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 XYLBO75191 536 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 SPATA31C1P0DKV0 1188 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 PRKCQQ04759 706 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.99■□□□□ 0.31
CHMP3-202ENST00000393773 CEP57Q86XR8 500 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 ZBTB8OSQ8IWT0 167 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 MCPH1Q8NEM0 835 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 KXD1Q9BQD3 176 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 HCFC1R1Q9NWW0 138 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 MTRRQ9UBK8 725 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 FBXO4Q9UKT5 387 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 MTF2Q9Y483 593 aaPredicted RBP16.99■□□□□ 0.31
CHMP3-202ENST00000393773 SPTBN2O15020 2390 aa16.99■□□□□ 0.31
CHMP3-202ENST00000393773 TMEM189-UBE2V1I3L0A0 370 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 KINO60870 393 aaKnown RBP16.98■□□□□ 0.31
CHMP3-202ENST00000393773 THP07101 528 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 FGFR3P22607 806 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 IGFBP6P24592 240 aaPredicted RBP16.98■□□□□ 0.31
CHMP3-202ENST00000393773 TXKP42681 527 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 ELAVL2Q12926 359 aaKnown RBP16.98■□□□□ 0.31
CHMP3-202ENST00000393773 RAB33AQ14088 237 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 PUM1Q14671 1186 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHMP3-202ENST00000393773 AXDND1Q5T1B0 1012 aaPredicted RBP16.98■□□□□ 0.31
CHMP3-202ENST00000393773 PDXDC1Q6P996 788 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 RSPO2Q6UXX9 243 aaPredicted RBP16.98■□□□□ 0.31
CHMP3-202ENST00000393773 MAEAQ7L5Y9 396 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 WASF1Q92558 559 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 BCO2Q9BYV7 579 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 OSBPL6Q9BZF3 934 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 BRMS1Q9HCU9 246 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 LTB4R2Q9NPC1 389 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 SPATA6Q9NWH7 488 aaPredicted RBP16.98■□□□□ 0.31
CHMP3-202ENST00000393773 KCNH3Q9ULD8 1083 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 CACNA1BQ00975 2339 aa16.98■□□□□ 0.31
CHMP3-202ENST00000393773 SPTLC1O15269 473 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 MED24O75448 989 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 LARGE1O95461 756 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 PRKCBP05771 671 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 XRCC6P12956 609 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHMP3-202ENST00000393773 OR1D2P34982 312 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 PRPF4BQ13523 1007 aaKnown RBP16.97■□□□□ 0.31
CHMP3-202ENST00000393773 UBXN2BQ14CS0 331 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 PABPC1LQ4VXU2 614 aaKnown RBP16.97■□□□□ 0.31
CHMP3-202ENST00000393773 SLC44A4Q53GD3 710 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 EEF1DP3Q658K8 133 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 CD300LGQ6UXG3 332 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 NOSTRINQ8IVI9 506 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 ING5Q8WYH8 240 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 PPP1R10Q96QC0 940 aaKnown RBP16.97■□□□□ 0.31
CHMP3-202ENST00000393773 C2orf40Q9H1Z8 148 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 TMEM60Q9H2L4 133 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 DNMT3BQ9UBC3 853 aaKnown RBP16.97■□□□□ 0.31
CHMP3-202ENST00000393773 POLIQ9UNA4 740 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 USP20Q9Y2K6 914 aa16.97■□□□□ 0.31
CHMP3-202ENST00000393773 F5P12259 2224 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 BTBD18B2RXH4 712 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 MAGEA9P43362 315 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 RBM25P49756 843 aaKnown RBP16.96■□□□□ 0.31
CHMP3-202ENST00000393773 PFKPQ01813 784 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 SLC5A9Q2M3M2 681 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 POTEHQ6S545 545 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 CATSPER3Q86XQ3 398 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 DIS3L2Q8IYB7 885 aaKnown RBP16.96■□□□□ 0.31
CHMP3-202ENST00000393773 C3orf58Q8NDZ4 430 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 NELL1Q92832 810 aa16.96■□□□□ 0.31
CHMP3-202ENST00000393773 GTF3C6Q969F1 213 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms