RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 EPB41P11171 864 aaKnown RBP11.73□□□□□ -0.53
PDGFD-202ENST00000393158 TPM4P67936 248 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 NOLC1Q14978 699 aaKnown RBP eCLIP11.73□□□□□ -0.53
PDGFD-202ENST00000393158 TPD52L1Q16890 204 aaPredicted RBP11.73□□□□□ -0.53
PDGFD-202ENST00000393158 UMODL1Q5DID0 1318 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 STXBP4Q6ZWJ1 553 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 RTN4RL1Q86UN2 441 aaPredicted RBP11.73□□□□□ -0.53
PDGFD-202ENST00000393158 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 PRMT7Q9NVM4 692 aaPredicted RBP11.73□□□□□ -0.53
PDGFD-202ENST00000393158 ANKFY1Q9P2R3 1169 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 GBF1Q92538 1859 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 LRRC53A6NM62 1247 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 DNM1LO00429 736 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 CCL5P13501 91 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 ABCD1P33897 745 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 CRYBB1P53674 252 aaPredicted RBP11.73□□□□□ -0.53
PDGFD-202ENST00000393158 PRPF4BQ13523 1007 aaKnown RBP11.73□□□□□ -0.53
PDGFD-202ENST00000393158 DCAF17Q5H9S7 520 aaPredicted RBP11.73□□□□□ -0.53
PDGFD-202ENST00000393158 REXO1L1PQ8IX06 675 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 DIS3LQ8TF46 1054 aaKnown RBP11.73□□□□□ -0.53
PDGFD-202ENST00000393158 KCNG1Q9UIX4 513 aa11.73□□□□□ -0.53
PDGFD-202ENST00000393158 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 KCNJ6P48051 423 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 LIG4P49917 911 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 CCDC40Q4G0X9 1142 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 C7orf31Q8N865 590 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 CELF4Q9BZC1 486 aaKnown RBP11.72□□□□□ -0.53
PDGFD-202ENST00000393158 TMEM51Q9NW97 253 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 AIPL1Q9NZN9 384 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 GCNT4Q9P109 453 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 EXOC7Q9UPT5 735 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 OGTO15294 1046 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 ZNF500O60304 480 aaPredicted RBP11.72□□□□□ -0.53
PDGFD-202ENST00000393158 MYCNP04198 464 aaPredicted RBP11.72□□□□□ -0.53
PDGFD-202ENST00000393158 CXCL8P10145 99 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 ACO1P21399 889 aaKnown RBP11.72□□□□□ -0.53
PDGFD-202ENST00000393158 MRPS6P82932 125 aaKnown RBP11.72□□□□□ -0.53
PDGFD-202ENST00000393158 CDK17Q00537 523 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 LPIN1Q14693 890 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 PDXDC1Q6P996 788 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 ZBTB33Q86T24 672 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 NME8Q8N427 588 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 MSTO1Q9BUK6 570 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 HES2Q9Y543 173 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 CDY2AQ9Y6F7 541 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 INO80B-WBP1J3KQ70 363 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 FGFR1OPO95684 399 aaKnown RBP11.72□□□□□ -0.53
PDGFD-202ENST00000393158 SFPQP23246 707 aaKnown RBP eCLIP11.72□□□□□ -0.53
PDGFD-202ENST00000393158 PHKA2P46019 1235 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 INO80BQ9C086 356 aaPredicted RBP11.72□□□□□ -0.53
PDGFD-202ENST00000393158 ERVK-5Q9HDB9 667 aa11.72□□□□□ -0.53
PDGFD-202ENST00000393158 CLDN3O15551 220 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 NFICP08651 508 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 PTGISQ16647 500 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 NLRP7Q8WX94 980 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 NXF3Q9H4D5 531 aaKnown RBP11.71□□□□□ -0.53
PDGFD-202ENST00000393158 TMEM8AQ9HCN3 771 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 CEP72Q9P209 647 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 FRMD4BQ9Y2L6 1034 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 AKR1B15C9JRZ8 316 aaPredicted RBP11.71□□□□□ -0.53
PDGFD-202ENST00000393158 F8VZ95 297 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 CKBP12277 381 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 GTF2H1P32780 548 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 TFDP1Q14186 410 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 FBXO47Q5MNV8 452 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 ZNF618Q5T7W0 954 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 ZSCAN30Q86W11 494 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 INTS2Q9H0H0 1204 aaKnown RBP11.71□□□□□ -0.53
PDGFD-202ENST00000393158 RBAKQ9NYW8 714 aaPredicted RBP11.71□□□□□ -0.53
PDGFD-202ENST00000393158 TFR2Q9UP52 801 aa11.71□□□□□ -0.53
PDGFD-202ENST00000393158 GREB1Q4ZG55 1949 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 KIAA0100Q14667 2235 aaKnown RBP11.71□□□□□ -0.54
PDGFD-202ENST00000393158 MCF2P10911 925 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 ZBED6P86452 979 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 PTPN11Q06124 597 aaPredicted RBP11.71□□□□□ -0.54
PDGFD-202ENST00000393158 PPP2R3AQ06190 1150 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 STRN3Q13033 797 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 PTK7Q13308 1070 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 TAF2Q6P1X5 1199 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 PCSK9Q8NBP7 692 aaKnown RBP11.71□□□□□ -0.54
PDGFD-202ENST00000393158 EHBP1Q8NDI1 1231 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 SLC30A5Q8TAD4 765 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 CPLX3Q8WVH0 158 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 DDX1Q92499 740 aaKnown RBP11.71□□□□□ -0.54
PDGFD-202ENST00000393158 TATDN2Q93075 761 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 TRAIPQ9BWF2 469 aa11.71□□□□□ -0.54
PDGFD-202ENST00000393158 LSM14BQ9BX40 385 aaKnown RBP11.71□□□□□ -0.54
PDGFD-202ENST00000393158 MAGEC2Q9UBF1 373 aaPredicted RBP11.71□□□□□ -0.54
PDGFD-202ENST00000393158 KIAA0391O15091 583 aaKnown RBP11.7□□□□□ -0.54
PDGFD-202ENST00000393158 P4HA2O15460 535 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 ITGB8P26012 769 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 ARHGAP25P42331 645 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 GSDMDP57764 484 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 SLFN12LQ6IEE8 588 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 PALB2Q86YC2 1186 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 C1orf127Q8N9H9 656 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 CGRRF1Q99675 332 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 PI4K2AQ9BTU6 479 aa11.7□□□□□ -0.54
PDGFD-202ENST00000393158 ACP6Q9NPH0 428 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms