RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 DGAT1O75907 488 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 FKBP1AP62942 108 aaKnown RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 ATP11AP98196 1134 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 CRYMQ14894 314 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 NT5DC3Q86UY8 548 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 RUBCNQ92622 972 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 KAT2BQ92831 832 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 PSMD1Q99460 953 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 TARS2Q9BW92 718 aaKnown RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 PDGFDQ9GZP0 370 aaPredicted RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 PI4K2BG5E9Z4 385 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 PODXLO00592 558 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 GNA15P30679 374 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 CHRNA3P32297 505 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 STX2P32856 288 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 ITIH3Q06033 890 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 LRRC23Q53EV4 343 aaPredicted RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 FAM133BQ5BKY9 247 aaKnown RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 FAM160B1Q5W0V3 765 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 GRK7Q8WTQ7 553 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 INPP4AQ96PE3 977 aaPredicted RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 SLC40A1Q9NP59 571 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 HOMER3Q9NSC5 361 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 HOXC10Q9NYD6 342 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 AJAP1Q9UKB5 411 aaPredicted RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 DIS3Q9Y2L1 958 aaKnown RBP11.24□□□□□ -0.61
CALD1-203ENST00000393118 PCDHA2Q9Y5H9 948 aa11.24□□□□□ -0.61
CALD1-203ENST00000393118 TNNC2P02585 160 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 KRT1P04264 644 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 LSP1P33241 339 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 MARSP56192 900 aaKnown RBP11.23□□□□□ -0.61
CALD1-203ENST00000393118 PGM5Q15124 567 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 DNAJC24Q6P3W2 148 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 CDR2LQ86X02 465 aaPredicted RBP11.23□□□□□ -0.61
CALD1-203ENST00000393118 KCTD17Q8N5Z5 321 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 ACTRT1Q8TDG2 376 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 TATDN2Q93075 761 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 ERP44Q9BS26 406 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 CARD9Q9H257 536 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 INTUQ9ULD6 942 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 MYH15Q9Y2K3 1946 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 CCDC88AQ3V6T2 1871 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 PFASO15067 1338 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 ATP5DP30049 168 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 CDC25CP30307 473 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 PPP2R2AP63151 447 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 FAM83AQ86UY5 434 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 CCDC13Q8IYE1 715 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 CCDC89Q8N998 374 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 WNT8AQ9H1J5 351 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 MRPL47Q9HD33 250 aaKnown RBP11.23□□□□□ -0.61
CALD1-203ENST00000393118 PXMP2Q9NR77 195 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 WRAP73Q9P2S5 460 aaPredicted RBP11.23□□□□□ -0.61
CALD1-203ENST00000393118 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 EDIL3O43854 480 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 PRKCIP41743 596 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 AARSP49588 968 aaKnown RBP eCLIP11.23□□□□□ -0.61
CALD1-203ENST00000393118 ACTR2P61160 394 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 PCNX4Q63HM2 1172 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 SPOPLQ6IQ16 392 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 SCYL2Q6P3W7 929 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 SV2AQ7L0J3 742 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 NLRP14Q86W24 1093 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 PALB2Q86YC2 1186 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 KRT35Q92764 455 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 RUNDC3BQ96NL0 473 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 TMEM8AQ9HCN3 771 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 GGA3Q9NZ52 723 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 SGK1O00141 431 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 TLR3O15455 904 aaKnown RBP11.23□□□□□ -0.61
CALD1-203ENST00000393118 MDH1P40925 334 aaKnown RBP11.23□□□□□ -0.61
CALD1-203ENST00000393118 ITGB3BPQ13352 177 aaPredicted RBP11.23□□□□□ -0.61
CALD1-203ENST00000393118 KCTD2Q14681 263 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 LRRC14Q15048 493 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 ARMC3Q5W041 872 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 GDAP1Q8TB36 358 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 FBXO25Q8TCJ0 367 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 DCPSQ96C86 337 aaKnown RBP11.23□□□□□ -0.61
CALD1-203ENST00000393118 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 COL20A1Q9P218 1284 aa11.23□□□□□ -0.61
CALD1-203ENST00000393118 CCDC160A6NGH7 325 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 STAM2O75886 525 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 LCA5LO95447 670 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 HLA-DRAP01903 254 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 CYP11B1P15538 503 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 EIF3BP55884 814 aaKnown RBP11.22□□□□□ -0.61
CALD1-203ENST00000393118 UGCGQ16739 394 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 ASTE1Q2TB18 679 aaPredicted RBP11.22□□□□□ -0.61
CALD1-203ENST00000393118 EAPPQ56P03 285 aaPredicted RBP11.22□□□□□ -0.61
CALD1-203ENST00000393118 CROCCP2Q86T23 111 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
CALD1-203ENST00000393118 MDM1Q8TC05 714 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 ATG4AQ8WYN0 398 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 TRIM11Q96F44 468 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 KRT17Q04695 432 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 SLMAPQ14BN4 828 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 EMC2Q15006 297 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 TAF11Q15544 211 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms