RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TRPC1P48995 793 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 HIC1Q14526 733 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 WDR45BQ5MNZ6 344 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 RARS2Q5T160 578 aaKnown RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 CYP4F22Q6NT55 531 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 C4orf50Q6ZRC1 276 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 NEK10Q6ZWH5 1172 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 SLC7A5P1Q8MH63 180 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 APPBP2Q92624 585 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 ESR2Q92731 530 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 FAIMQ9NVQ4 179 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 HDAC9Q9UKV0 1011 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 DTNAQ9Y4J8 743 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 UMODL1Q5DID0 1318 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 USP32Q8NFA0 1604 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 CCDC194A0A1B0GVG4 234 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 RCCD1A6NED2 376 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 PODXLO00592 558 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 SH3BP5O60239 455 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 DAB1O75553 588 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 SERPINI2O75830 405 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 LDHBP07195 334 aaKnown RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 ENDOUP21128 410 aaKnown RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 SERPINB1P30740 379 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 PHKA1P46020 1223 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 BCAMP50895 628 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 BLVRAP53004 296 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 KLHL35Q6PF15 583 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 TTC39CQ8N584 583 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 HPS1Q92902 700 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 CALML4Q96GE6 196 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF317Q96PQ6 595 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 LSM14BQ9BX40 385 aaKnown RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 ROPN1BQ9BZX4 212 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 MRPL46Q9H2W6 279 aaKnown RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 ROPN1Q9HAT0 212 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 TYW1Q9NV66 732 aaKnown RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 TTC7AQ9ULT0 858 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 SPEF1Q9Y4P9 236 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 PCDHB6Q9Y5E3 794 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 SOS2Q07890 1332 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 TNFAIP8O95379 198 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 SERPING1P05155 500 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 STMN1P16949 149 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 GNAZP19086 355 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 PRCPP42785 496 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 C15orf59Q2T9L4 293 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 TRMT5Q32P41 509 aaKnown RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 TTC38Q5R3I4 469 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 BTNL9Q6UXG8 535 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 EXOC3L1Q86VI1 746 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 OR6Y1Q8NGX8 325 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 SH3TC2Q8TF17 1288 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 CLIP3Q96DZ5 547 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 HAUS7Q99871 368 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 MST1RQ04912 1400 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 FAM187AA6NFU0 413 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 FAM47DPA6NHR8 397 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 B4E1Z4 1266 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 RIMBP2O15034 1052 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 PFDN6O15212 129 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 DEXIO95424 95 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ZBED1O96006 694 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ENO1P06733 434 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 SCG2P13521 617 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 FDPSP14324 419 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 CD44P16070 742 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 MAP4P27816 1152 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ADCY8P40145 1251 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 GYG1P46976 350 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 IST1P53990 364 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 RELAQ04206 551 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 PDIA6Q15084 440 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 OASLQ15646 514 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 KIAA1755Q5JYT7 1200 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 DTHD1Q6ZMT9 781 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ACAD11Q709F0 780 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF579Q8NAF0 562 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 PIH1D3Q9NQM4 214 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 SUGT1Q9Y2Z0 365 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ZNF532Q9HCE3 1301 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ITSN1Q15811 1721 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 IFT172Q9UG01 1749 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 EXOC1LA0A1B0GW35 172 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 DDX3XO00571 662 aaKnown RBP eCLIP8.06□□□□□ -1.122e-9■■□□□ 14.2
VTI1A-201ENST00000393077 SPOPO43791 374 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 FKBP6O75344 327 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 PRDM1O75626 825 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 PABPC4LP0CB38 370 aaKnown RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 SRGNP10124 158 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ABCB4P21439 1286 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 PRKACBP22694 351 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 NSUN2Q08J23 767 aaKnown RBP eCLIP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 ITGADQ13349 1161 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 SPIDRQ14159 915 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 BTG3Q14201 252 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-201ENST00000393077 WTAPQ15007 396 aa8.06□□□□□ -1.12
VTI1A-201ENST00000393077 MTFR1Q15390 333 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms