RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SENP2Q9HC62 589 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 SMAD1Q15797 465 aaKnown RBP13.86□□□□□ -0.19
LCA5-202ENST00000392959 C16orf87Q6PH81 154 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 C4orf33Q8N1A6 199 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 DTX3LQ8TDB6 740 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 C18orf8Q96DM3 657 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 ZNF512BQ96KM6 892 aaPredicted RBP13.86□□□□□ -0.19
LCA5-202ENST00000392959 ERP44Q9BS26 406 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 ISCUQ9H1K1 167 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 TBX3O15119 743 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 FASTKD1Q53R41 847 aaKnown RBP13.86□□□□□ -0.19
LCA5-202ENST00000392959 OR6P1Q8NGX9 317 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 ERP27Q96DN0 273 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 ZNF668Q96K58 619 aaPredicted RBP13.86□□□□□ -0.19
LCA5-202ENST00000392959 TSSK1BQ9BXA7 367 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 FOXP3Q9BZS1 431 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 PIK3R2O00459 728 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 FDX1P10109 184 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 SSTR3P32745 418 aaPredicted RBP13.86□□□□□ -0.19
LCA5-202ENST00000392959 AARSP49588 968 aaKnown RBP eCLIP13.86□□□□□ -0.19
LCA5-202ENST00000392959 ERFP50548 548 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 GRIN1Q05586 938 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 TWF2Q6IBS0 349 aaKnown RBP13.86□□□□□ -0.19
LCA5-202ENST00000392959 ULK4Q96C45 1275 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 OLA1Q9NTK5 396 aaKnown RBP13.86□□□□□ -0.19
LCA5-202ENST00000392959 SLC13A4Q9UKG4 626 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 IQGAP3Q86VI3 1631 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 PPP1R3GB7ZBB8 358 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 ECE2O60344 883 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 TMEM253P0C7T8 217 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 YWHABP31946 246 aaKnown RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 PRAMEP78395 509 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 KYNUQ16719 465 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 SCN4BQ8IWT1 228 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 ARL8AQ96BM9 186 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 IFT43Q96FT9 208 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 ROPN1BQ9BZX4 212 aaPredicted RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 CCDC90BQ9GZT6 254 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 ROPN1Q9HAT0 212 aaPredicted RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 KLHL11Q9NVR0 708 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 NEU2Q9Y3R4 380 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 ALG6Q9Y672 507 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 A8MXQ7 604 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 KIAA0391O15091 583 aaKnown RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 FOXD4Q12950 439 aaPredicted RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 MAPRE2Q15555 327 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 AGR3Q8TD06 166 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 RMDN2Q96LZ7 410 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 WRNIP1Q96S55 665 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 TIPINQ9BVW5 301 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 EPB41L4AQ9HCS5 686 aaPredicted RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 NPHS2Q9NP85 383 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 HERC5Q9UII4 1024 aaKnown RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 PLAGL2Q9UPG8 496 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 TRAF3IP3Q9Y228 551 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 TMEM120BA0PK00 339 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 ENO1P06733 434 aaKnown RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 SESN2P58004 480 aaPredicted RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 KLC1Q07866 573 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 CAPRIN1Q14444 709 aaKnown RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 WDR72Q3MJ13 1102 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 THEM5Q8N1Q8 247 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 ACAP3Q96P50 834 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 PSMC3IPQ9P2W1 217 aaPredicted RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 PNMA3Q9UL41 463 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 CLTCL1P53675 1640 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 APOL1O14791 398 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 KIF1CO43896 1103 aaKnown RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 APRTP07741 180 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 EFNA5P52803 228 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 NDUFAF2Q8N183 169 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 TMEM117Q9H0C3 514 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 PPCSQ9HAB8 311 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 SCHIP1Q9P0W5 487 aaPredicted RBP13.85□□□□□ -0.19
LCA5-202ENST00000392959 ARHGEF40Q8TER5 1519 aa13.85□□□□□ -0.19
LCA5-202ENST00000392959 ZBTB22O15209 634 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 ANP32DO95626 131 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 KLK7P49862 253 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 CPA5Q8WXQ8 436 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 ARHGEF1Q92888 912 aaKnown RBP13.84□□□□□ -0.19
LCA5-202ENST00000392959 SH2D3AQ9BRG2 576 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 FUT8Q9BYC5 575 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 CELF4Q9BZC1 486 aaKnown RBP13.84□□□□□ -0.19
LCA5-202ENST00000392959 OSBPL8Q9BZF1 889 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 HECW2Q9P2P5 1572 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 GLI2P10070 1586 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 CCT8L1PA6NM43 557 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 CSF1RP07333 972 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 ADRA2BP18089 450 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 COMTP21964 271 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 ELF1P32519 619 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 ALDH18A1P54886 795 aaKnown RBP13.84□□□□□ -0.19
LCA5-202ENST00000392959 RNF135Q8IUD6 432 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 RAPGEF5Q92565 580 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 WDR35Q9P2L0 1181 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 STX18Q9P2W9 335 aaKnown RBP13.84□□□□□ -0.19
LCA5-202ENST00000392959 HPS5Q9UPZ3 1129 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 STXBP3O00186 592 aa13.84□□□□□ -0.19
LCA5-202ENST00000392959 DGAT1O75907 488 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms