RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TARBP2Q15633 366 aaKnown RBP20.39■□□□□ 0.85
CCDC50-202ENST00000392456 NIFKQ9BYG3 293 aaKnown RBP20.39■□□□□ 0.85
CCDC50-202ENST00000392456 VTA1Q9NP79 307 aa20.39■□□□□ 0.85
CCDC50-202ENST00000392456 AGPAT3Q9NRZ7 376 aa20.39■□□□□ 0.85
CCDC50-202ENST00000392456 BAIAP2L1Q9UHR4 511 aa20.39■□□□□ 0.85
CCDC50-202ENST00000392456 NUB1Q9Y5A7 615 aa20.39■□□□□ 0.85
CCDC50-202ENST00000392456 TARSL2A2RTX5 802 aaKnown RBP20.38■□□□□ 0.85
CCDC50-202ENST00000392456 CALUO43852 315 aaPredicted RBP20.38■□□□□ 0.85
CCDC50-202ENST00000392456 DNM2P50570 870 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 POLGP54098 1239 aaPredicted RBP20.38■□□□□ 0.85
CCDC50-202ENST00000392456 EMC2Q15006 297 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 PTGISQ16647 500 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 NLRP14Q86W24 1093 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 TRIM59Q8IWR1 403 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 TMEM161BQ8NDZ6 487 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 CCHCR1Q8TD31 782 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 DHX33Q9H6R0 707 aaKnown RBP20.38■□□□□ 0.85
CCDC50-202ENST00000392456 AZI2Q9H6S1 392 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 ZNF510Q9Y2H8 683 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 LGR5O75473 907 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 DNAJC8O75937 253 aaPredicted RBP20.38■□□□□ 0.85
CCDC50-202ENST00000392456 SMPD1P17405 629 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 ABL2P42684 1182 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 SCTRP47872 440 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 NCKAP1LP55160 1127 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 MAN2A1Q16706 1144 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 LACTB2Q53H82 288 aaPredicted RBP20.38■□□□□ 0.85
CCDC50-202ENST00000392456 TTMPQ5BVD1 217 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 ZSWIM2Q8NEG5 633 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 POLR3FQ9H1D9 316 aaPredicted RBP20.38■□□□□ 0.85
CCDC50-202ENST00000392456 USP20Q9Y2K6 914 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 ARID2Q68CP9 1835 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 CEP350Q5VT06 3117 aa20.38■□□□□ 0.85
CCDC50-202ENST00000392456 ZBTB42B2RXF5 422 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 AOC2O75106 756 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 NAT1P18440 290 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 TM4SF4P48230 202 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 GTF2BQ00403 316 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 MAP2K5Q13163 448 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 ACVR2BQ13705 512 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 FAM160B1Q5W0V3 765 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 AFG1LQ8WV93 481 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 TIPINQ9BVW5 301 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 ZFYVE28Q9HCC9 887 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 ITIH6Q6UXX5 1313 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 CYP2B6P20813 491 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 EIF4BP23588 611 aaKnown RBP20.37■□□□□ 0.85
CCDC50-202ENST00000392456 MYBPC2Q14324 1141 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 SYCP3Q8IZU3 236 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 TRAPPC12Q8WVT3 735 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 RNPEPQ9H4A4 650 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 WDR35Q9P2L0 1181 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 ADGRG1Q9Y653 693 aa20.37■□□□□ 0.85
CCDC50-202ENST00000392456 A0A1W2PQC6 194 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 TTC26A0AVF1 554 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 SOWAHDA6NJG2 315 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 AKR1B15C9JRZ8 316 aaPredicted RBP20.36■□□□□ 0.85
CCDC50-202ENST00000392456 EPHB6O15197 1021 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 TOMM70O94826 608 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 FAM107AO95990 144 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 CYP2J2P51589 502 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 INHBCP55103 352 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 MARSP56192 900 aaKnown RBP20.36■□□□□ 0.85
CCDC50-202ENST00000392456 CCDC38Q502W7 563 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 PPFIBP1Q86W92 1011 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 SLC35F6Q8N357 371 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 ASAP3Q8TDY4 903 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 KIFAP3Q92845 792 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 UBE2OQ9C0C9 1292 aaKnown RBP20.36■□□□□ 0.85
CCDC50-202ENST00000392456 ARHGAP39Q9C0H5 1083 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 PCIF1Q9H4Z3 704 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 NOP53Q9NZM5 478 aaKnown RBP20.36■□□□□ 0.85
CCDC50-202ENST00000392456 GJD2Q9UKL4 321 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 PHF24Q9UPV7 400 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 MAPTP10636 758 aaKnown RBP20.36■□□□□ 0.85
CCDC50-202ENST00000392456 DMP1Q13316 513 aaPredicted RBP20.36■□□□□ 0.85
CCDC50-202ENST00000392456 RIPK1Q13546 671 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 MCPH1Q8NEM0 835 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 TEKT4Q8WW24 435 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 USP6NLQ92738 828 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 ARL8AQ96BM9 186 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 LENG1Q96BZ8 264 aaPredicted RBP20.36■□□□□ 0.85
CCDC50-202ENST00000392456 PANX2Q96RD6 677 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 NAPGQ99747 312 aaPredicted RBP20.36■□□□□ 0.85
CCDC50-202ENST00000392456 ARPC5LQ9BPX5 153 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 CBWD1Q9BRT8 395 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 NTPCRQ9BSD7 190 aaKnown RBP20.36■□□□□ 0.85
CCDC50-202ENST00000392456 PIDD1Q9HB75 910 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 KMT5AQ9NQR1 393 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 NRBP2Q9NSY0 501 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 PCMTD2Q9NV79 361 aa20.36■□□□□ 0.85
CCDC50-202ENST00000392456 DENND3A2RUS2 1198 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 SRRM3A6NNA2 597 aaPredicted RBP20.35■□□□□ 0.85
CCDC50-202ENST00000392456 CREB3O43889 395 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 MFAP3LO75121 409 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 LUC7L3O95232 432 aaKnown RBP20.35■□□□□ 0.85
CCDC50-202ENST00000392456 CAP1Q01518 475 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 APBA1Q02410 837 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 SREBF2Q12772 1141 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 CCNI2Q6ZMN8 369 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms