RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 RASGEF1CQ8N431 466 aa19.93■□□□□ 0.78
STRADB-202ENST00000392249 ATP8B4Q8TF62 1192 aa19.93■□□□□ 0.78
STRADB-202ENST00000392249 SCFD2Q8WU76 684 aa19.93■□□□□ 0.78
STRADB-202ENST00000392249 DDX1Q92499 740 aaKnown RBP19.93■□□□□ 0.78
STRADB-202ENST00000392249 DDX3YO15523 660 aaKnown RBP19.92■□□□□ 0.78
STRADB-202ENST00000392249 RAD51CO43502 376 aa19.92■□□□□ 0.78
STRADB-202ENST00000392249 PLCB4Q15147 1175 aa19.92■□□□□ 0.78
STRADB-202ENST00000392249 WDR44Q5JSH3 913 aa19.92■□□□□ 0.78
STRADB-202ENST00000392249 IER5Q5VY09 327 aa19.92■□□□□ 0.78
STRADB-202ENST00000392249 ENOSF1Q7L5Y1 443 aa19.92■□□□□ 0.78
STRADB-202ENST00000392249 TRAPPC12Q8WVT3 735 aa19.92■□□□□ 0.78
STRADB-202ENST00000392249 EPB41L5Q9HCM4 733 aa19.92■□□□□ 0.78
STRADB-202ENST00000392249 CLDN3O15551 220 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 VNN1O95497 513 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 HADHBP55084 474 aaKnown RBP19.91■□□□□ 0.78
STRADB-202ENST00000392249 DMTNQ08495 405 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 LAMTOR4Q0VGL1 99 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 DCAF12L1Q5VU92 463 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 PLPPR4Q7Z2D5 763 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 IFT20Q8IY31 132 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 RNF149Q8NC42 400 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 TMEM110-MUSTN1A8MSY1 372 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 KRIT1O00522 736 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 MSCO60682 206 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 TNFRSF8P28908 595 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 EPHB4P54760 987 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 GYS2P54840 703 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 ZBTB33Q86T24 672 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 MORC4Q8TE76 937 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 CALR3Q96L12 384 aaKnown RBP19.91■□□□□ 0.78
STRADB-202ENST00000392249 GDF3Q9NR23 364 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 TRPC6Q9Y210 931 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 PPME1Q9Y570 386 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 ALG6Q9Y672 507 aa19.91■□□□□ 0.78
STRADB-202ENST00000392249 CLSTN1O94985 981 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 ITGA4P13612 1032 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 CARSP49589 748 aaKnown RBP19.9■□□□□ 0.78
STRADB-202ENST00000392249 EFNA5P52803 228 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 MKRN3Q13064 507 aaKnown RBP19.9■□□□□ 0.78
STRADB-202ENST00000392249 TTLL4Q14679 1199 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 HSP90B2PQ58FF3 399 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 OR5B17Q8NGF7 314 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 TCP11Q8WWU5 503 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 IFT81Q8WYA0 676 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 ZNF653Q96CK0 615 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 ZNF668Q96K58 619 aaPredicted RBP19.9■□□□□ 0.78
STRADB-202ENST00000392249 CGRRF1Q99675 332 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 TCHPQ9BT92 498 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 CCDC113Q9H0I3 377 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 PNMA3Q9UL41 463 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 CNTNAP2Q9UHC6 1331 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 POTEJP0CG39 1038 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 TNFSF9P41273 254 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 MXD4Q14582 209 aaPredicted RBP19.9■□□□□ 0.78
STRADB-202ENST00000392249 TCEAL1Q15170 157 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 CDCA2Q69YH5 1023 aaPredicted RBP19.9■□□□□ 0.78
STRADB-202ENST00000392249 C11orf63Q6NUN7 778 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 ZPBP2Q6X784 338 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 ARMCX2Q7L311 632 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 RHPN2Q8IUC4 686 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 SHCBP1Q8NEM2 672 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 ZBTB10Q96DT7 871 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 MRPL4Q9BYD3 311 aaKnown RBP19.9■□□□□ 0.78
STRADB-202ENST00000392249 DDX47Q9H0S4 455 aaKnown RBP19.9■□□□□ 0.78
STRADB-202ENST00000392249 CLEC11AQ9Y240 323 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 SCN4AP35499 1836 aa19.9■□□□□ 0.78
STRADB-202ENST00000392249 ZC3H4Q9UPT8 1303 aaKnown RBP19.9■□□□□ 0.78
STRADB-202ENST00000392249 IGKV6-21A0A0C4DH24 114 aa19.89■□□□□ 0.77
STRADB-202ENST00000392249 GRIN3BO60391 1043 aa19.89■□□□□ 0.77
STRADB-202ENST00000392249 PHACTR2O75167 634 aa19.89■□□□□ 0.77
STRADB-202ENST00000392249 FGGP02679 453 aa19.89■□□□□ 0.77
STRADB-202ENST00000392249 GJB1P08034 283 aa19.89■□□□□ 0.77
STRADB-202ENST00000392249 MESDQ14696 234 aa19.89■□□□□ 0.77
STRADB-202ENST00000392249 ALG3Q92685 438 aa19.89■□□□□ 0.77
STRADB-202ENST00000392249 FAM81BQ96LP2 452 aa19.89■□□□□ 0.77
STRADB-202ENST00000392249 APOBEC3GQ9HC16 384 aaKnown RBP19.89■□□□□ 0.77
STRADB-202ENST00000392249 NFU1Q9UMS0 254 aa19.89■□□□□ 0.77
STRADB-202ENST00000392249 IQCA1LA6NCM1 817 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 ASB14A6NK59 587 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 GAS2O43903 313 aaKnown RBP19.88■□□□□ 0.77
STRADB-202ENST00000392249 TOM1L1O75674 476 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 PRKCBP05771 671 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 TRADDQ15628 312 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 GJC2Q5T442 439 aaPredicted RBP19.88■□□□□ 0.77
STRADB-202ENST00000392249 MAP1SQ66K74 1059 aaPredicted RBP19.88■□□□□ 0.77
STRADB-202ENST00000392249 EMBQ6PCB8 327 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 ZBTB8OSQ8IWT0 167 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 GPRC5AQ8NFJ5 357 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 ZNF564Q8TBZ8 553 aaPredicted RBP19.88■□□□□ 0.77
STRADB-202ENST00000392249 CASKIN2Q8WXE0 1202 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 RNPC3Q96LT9 517 aaKnown RBP19.88■□□□□ 0.77
STRADB-202ENST00000392249 NUP85Q9BW27 656 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 CARD9Q9H257 536 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 SMARCAD1Q9H4L7 1026 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 VPS18Q9P253 973 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 PDHXO00330 501 aa19.88■□□□□ 0.77
STRADB-202ENST00000392249 SART1O43290 800 aaKnown RBP19.88■□□□□ 0.77
STRADB-202ENST00000392249 AARSP49588 968 aaKnown RBP eCLIP19.88■□□□□ 0.77
STRADB-202ENST00000392249 ZNF211Q13398 564 aaPredicted RBP19.88■□□□□ 0.77
STRADB-202ENST00000392249 MAPK6Q16659 721 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms