RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 WDR49Q8IV35 697 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 LNX1Q8TBB1 728 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 LMBR1Q8WVP7 490 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 NOX5Q96PH1 765 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 CASP8AP2Q9UKL3 1982 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 MOCS3O95396 460 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 HLA-DRAP01903 254 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 SEZ6Q53EL9 994 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 CYP4F22Q6NT55 531 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 TRAPPC11Q7Z392 1133 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 KIAA0319LQ8IZA0 1049 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 MNS1Q8NEH6 495 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 TSC1Q92574 1164 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 LENG1Q96BZ8 264 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 CARD6Q9BX69 1037 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 AP5M1Q9H0R1 490 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 C1orf112Q9NSG2 853 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 SETD4Q9NVD3 440 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 JRKLQ9Y4A0 524 aa12.35□□□□□ -0.43
SMARCAL1-203ENST00000392128 MBLAC1A4D2B0 266 aaPredicted RBP12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 HAS3O00219 553 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 VNN1O95497 513 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 SMIM10L2AP0DMW4 78 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 SMIM10L2BP0DMW5 78 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 AKR1A1P14550 325 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 PIK3CAP42336 1068 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 LACTBP83111 547 aaPredicted RBP12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 CDC42EP1Q00587 391 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 NOGQ13253 232 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 BIRC3Q13489 604 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 MFSD10Q14728 455 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 TMEM132AQ24JP5 1023 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 WDR44Q5JSH3 913 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 NFRKBQ6P4R8 1299 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 GLYCTKQ8IVS8 523 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 TATDN2Q93075 761 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 AGPAT1Q99943 283 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 CDT1Q9H211 546 aa12.34□□□□□ -0.43
SMARCAL1-203ENST00000392128 ATP1A1P05023 1023 aaKnown RBP12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 TNFAIP3P21580 790 aa12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 PSMC4P43686 418 aa12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 POU5F1Q01860 360 aaKnown RBP12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 NCBP1Q09161 790 aaKnown RBP12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 WHAMMP3Q1A5X7 153 aa12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 EEF1DP3Q658K8 133 aa12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 SRGAP1Q7Z6B7 1085 aa12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 LRRN4CLQ8ND94 238 aa12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 U2AF1L4Q8WU68 220 aaKnown RBP12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 NLRP7Q8WX94 980 aa12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 PI4K2AQ9BTU6 479 aa12.33□□□□□ -0.43
SMARCAL1-203ENST00000392128 SMIM35A0A1B0GVV1 85 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 EFCAB8A8MWE9 144 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 ENC1O14682 589 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 TADA3O75528 432 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 TOMM70O94826 608 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 H2AFZP0C0S5 128 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 MCF2P10911 925 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 PSEN2P49810 448 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 H2AFVQ71UI9 128 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 REM2Q8IYK8 340 aaPredicted RBP12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 CEP112Q8N8E3 955 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 OR5B17Q8NGF7 314 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 FAM84AQ96KN4 292 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 KATNAL1Q9BW62 490 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 ARHGAP39Q9C0H5 1083 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 NOCTQ9UK39 431 aaKnown RBP12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 PCDHGC5Q9Y5F6 944 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 SAR1BQ9Y6B6 198 aa12.33□□□□□ -0.44
SMARCAL1-203ENST00000392128 A0A0A6YYK5 440 aaPredicted RBP12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 DUSP11O75319 330 aaKnown RBP12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 CYBAP13498 195 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 ADAM17P78536 824 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 FSCN1Q16658 493 aaKnown RBP12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 TRPV1Q8NER1 839 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 EPS8L1Q8TE68 723 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 PPP1R16BQ96T49 567 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 PDZD7Q9H5P4 517 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 CYP26A1O43174 497 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 BUB1O43683 1085 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 B4GALT4O60513 344 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 IL18RAPO95256 599 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 MYL3P08590 195 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 ARF4P18085 180 aaPredicted RBP12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 USP8P40818 1118 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 IRX5P78411 483 aaPredicted RBP12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 KYAT1Q16773 422 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 DUOXA2Q1HG44 320 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 MFSD14CQ5VZR4 134 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 THNSL1Q8IYQ7 743 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 SLC20A1Q8WUM9 679 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 ANKRD7Q92527 254 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 SCLT1Q96NL6 688 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 ADAMTS10Q9H324 1103 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 HDAC6Q9UBN7 1215 aa12.32□□□□□ -0.44
SMARCAL1-203ENST00000392128 GPR25O00155 361 aa12.31□□□□□ -0.44
SMARCAL1-203ENST00000392128 TSPAN1O60635 241 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms