RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 B4GALT6Q9UBX8 382 aa0.88□□□□□ -2.27
SNORD28-201ENST00000384706 EVLQ9UI08 416 aaPredicted RBP0.88□□□□□ -2.27
SNORD28-201ENST00000384706 MSRAQ9UJ68 235 aa0.88□□□□□ -2.27
SNORD28-201ENST00000384706 ST3GAL5Q9UNP4 418 aa0.88□□□□□ -2.27
SNORD28-201ENST00000384706 ZKSCAN5Q9Y2L8 839 aa0.88□□□□□ -2.27
SNORD28-201ENST00000384706 SPO11Q9Y5K1 396 aa0.88□□□□□ -2.27
SNORD28-201ENST00000384706 ZNF804BA4D1E1 1349 aa0.88□□□□□ -2.27
SNORD28-201ENST00000384706 PNPLA7Q6ZV29 1317 aa0.88□□□□□ -2.27
SNORD28-201ENST00000384706 TRGV11A0A075B6L2 103 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 CCDC78A2IDD5 438 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 WIPF3A6NGB9 483 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 CXorf49A8MYA2 514 aaPredicted RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 H3BNC9 293 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 CBX4O00257 560 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 PLD2O14939 933 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 TP73O15350 636 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 YY2O15391 372 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 ADCY6O43306 1168 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 KCNAB3O43448 404 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 ORC4O43929 436 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 GAS7O60861 476 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 RAB11FIP3O75154 756 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 SEC24DO94855 1032 aaPredicted RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 PRSS23O95084 383 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 POMCP01189 267 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 GASTP01350 101 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 ASLP04424 464 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 PRKCGP05129 697 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 SNRPA1P09661 255 aaKnown RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 ATP2A2P16615 1042 aaKnown RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 ATP2B1P20020 1258 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 FGFR4P22455 802 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 KELP23276 732 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 SLC6A2P23975 617 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 CTSSP25774 331 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 ITPKBP27987 946 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 MPGP29372 298 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 ADSLP30566 484 aaPredicted RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 CCKBRP32239 447 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 GTF2F1P35269 517 aaKnown RBP eCLIP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 SREBF1P36956 1147 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 FOLR3P41439 243 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 GPR15P49685 360 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 FLT3LGP49771 235 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 CCT4P50991 539 aaKnown RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 TUBA4AP68366 448 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 PPARAQ07869 468 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 LRRC32Q14392 662 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 UBXN2BQ14CS0 331 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 SF3B3Q15393 1217 aaKnown RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 CYP2A13Q16696 494 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 CCDC178Q5BJE1 867 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 C19orf54Q5BKX5 351 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 FAM47AQ5JRC9 791 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 ZBTB41Q5SVQ8 909 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 GPR158Q5T848 1215 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 CDCA2Q69YH5 1023 aaPredicted RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 FCRLBQ6BAA4 426 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 C11orf87Q6NUJ2 197 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 TSHZ1Q6ZSZ6 1077 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 AMIGO2Q86SJ2 522 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 THNSL2Q86YJ6 484 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 PASD1Q8IV76 773 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 COLGALT2Q8IYK4 626 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 NXPE1Q8N323 547 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 ZSWIM2Q8NEG5 633 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 HASPINQ8TF76 798 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 SNX33Q8WV41 574 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 CHTF18Q8WVB6 975 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 TFAP2BQ92481 460 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 RPL36ALQ969Q0 106 aaKnown RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 RGMAQ96B86 450 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 MARS2Q96GW9 593 aaKnown RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 FUBP3Q96I24 572 aaKnown RBP eCLIP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 FBXL20Q96IG2 436 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 DEPDC7Q96QD5 511 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 HAPLN3Q96S86 360 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 SRPK1Q96SB4 655 aaKnown RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 TIMP4Q99727 224 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 WACQ9BTA9 647 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 MRI1Q9BV20 369 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 KRTAP2-2Q9BYT5 123 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 BHMT2Q9H2M3 363 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 RNPEPQ9H4A4 650 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 UNKLQ9H9P5 680 aaKnown RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 NCOA5Q9HCD5 579 aaKnown RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 NRIP3Q9NQ35 241 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 TMEM74BQ9NUR3 256 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 THG1LQ9NWX6 298 aaKnown RBP0.87□□□□□ -2.27
SNORD28-201ENST00000384706 KCTD5Q9NXV2 234 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 GPRC5DQ9NZD1 345 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 USP25Q9UHP3 1055 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 PRSS50Q9UI38 385 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 KCNG1Q9UIX4 513 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 EDARQ9UNE0 448 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 ENTPD2Q9Y5L3 495 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 WNT6Q9Y6F9 365 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 NUMBLQ9Y6R0 609 aa0.87□□□□□ -2.27
SNORD28-201ENST00000384706 AOX1Q06278 1338 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms