RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 PGBD4Q96DM1 585 aa4.31□□□□□ -1.72
RNU6-39P-201ENST00000384344 CEP95Q96GE4 821 aa4.31□□□□□ -1.72
RNU6-39P-201ENST00000384344 TMX3Q96JJ7 454 aa4.31□□□□□ -1.72
RNU6-39P-201ENST00000384344 PUS7Q96PZ0 661 aaKnown RBP4.31□□□□□ -1.72
RNU6-39P-201ENST00000384344 MRI1Q9BV20 369 aa4.31□□□□□ -1.72
RNU6-39P-201ENST00000384344 PNMA8BQ9ULN7 279 aaPredicted RBP4.31□□□□□ -1.72
RNU6-39P-201ENST00000384344 CXorf49A8MYA2 514 aaPredicted RBP4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 DIRC3C9JPN6 131 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 TRIM24O15164 1050 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 AKAP10O43572 662 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 OFD1O75665 1012 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 ARIH2O95376 493 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 POMCP01189 267 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 AMHP03971 560 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 SMARCA1P28370 1054 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 CYP2C19P33261 490 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 BUD31P41223 144 aaPredicted RBP4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 ALDH1A3P47895 512 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 RAB27AP51159 221 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 SCNN1GP51170 649 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 RABGGTBP53611 331 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 NAIF1Q69YI7 327 aaPredicted RBP4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 OTUD7BQ6GQQ9 843 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 DBX2Q6ZNG2 339 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 HTR3DQ70Z44 454 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 TMPRSS6Q8IU80 811 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 AOPEPQ8N6M6 819 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 NLGN4YQ8NFZ3 816 aaPredicted RBP4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 OR2I1PQ8NGU4 316 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 JPH3Q8WXH2 748 aaPredicted RBP4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 CLPTM1LQ96KA5 538 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 DCLRE1CQ96SD1 692 aaKnown RBP4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 MAP3K14Q99558 947 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 LSM14BQ9BX40 385 aaKnown RBP4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 KMT5AQ9NQR1 393 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 GNL3LQ9NVN8 582 aaKnown RBP4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 ZIM2Q9NZV7 527 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 CALCOCO1Q9P1Z2 691 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 LIMCH1Q9UPQ0 1083 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 POLHQ9Y253 713 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 RUVBL1Q9Y265 456 aaKnown RBP4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 MYRFQ9Y2G1 1151 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 IPPQ9Y573 584 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 PCDHA13Q9Y5I0 950 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 ACTL7AQ9Y615 435 aa4.3□□□□□ -1.72
RNU6-39P-201ENST00000384344 XDHP47989 1333 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 KLRG2A4D1S0 409 aaPredicted RBP4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 SLC16A6O15403 523 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 ABLIM3O94929 683 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 SCAF4O95104 1147 aaKnown RBP4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 MTHFD1P11586 935 aaKnown RBP4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 HSPA6P17066 643 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 SLC6A9P48067 706 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 CTXN1P60606 82 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 MTM1Q13496 603 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 PPP2R5AQ15172 486 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 C3orf36Q3SXR2 165 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 CCDC157Q569K6 752 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 IFIT1BQ5T764 474 aaKnown RBP4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 ZNF529Q6P280 563 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 USP45Q70EL2 814 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 GPRIN1Q7Z2K8 1008 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 RNF169Q8NCN4 708 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 EXTL1Q92935 676 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 PLEKHG4BQ96PX9 1271 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 NDC1Q9BTX1 674 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 CPEB1Q9BZB8 566 aaKnown RBP4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 C11orf54Q9H0W9 315 aaPredicted RBP4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 CDH19Q9H159 772 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 NMRK2Q9NPI5 230 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 SERPINB13Q9UIV8 391 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 SORCS3Q9UPU3 1222 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 SIK3Q9Y2K2 1263 aa4.29□□□□□ -1.72
RNU6-39P-201ENST00000384344 ATRNL1Q5VV63 1379 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 KIAA0391O15091 583 aaKnown RBP4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 RFPL1O75677 317 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 ZRANB2O95218 330 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 PEX11BO96011 259 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 HLA-DOAP06340 250 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 POU2F2P09086 479 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 HMGB1P09429 215 aaKnown RBP4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 INSRRP14616 1297 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 PDCP20941 246 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 PCSK1P29120 753 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 IL10RAQ13651 578 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 CDSNQ15517 529 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 ZXDCQ2QGD7 858 aaPredicted RBP4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 PGS1Q32NB8 556 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 RABL3Q5HYI8 236 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 ANKS6Q68DC2 871 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 CXorf57Q6NSI4 855 aaKnown RBP4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 SEM1Q6ZVN7 128 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 PLXDC1Q8IUK5 500 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 CHPFQ8IZ52 775 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 SYNE4Q8N205 404 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 C3orf20Q8ND61 904 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 SLC35B2Q8TB61 432 aa4.28□□□□□ -1.72
RNU6-39P-201ENST00000384344 CPT1CQ8TCG5 803 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms