RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 CDY1Q9Y6F8 540 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 ANKRD26Q9UPS8 1709 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 RAD51CO43502 376 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 SF3B3Q15393 1217 aaKnown RBP13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 ARMCX4Q5H9R4 360 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 TRIM72Q6ZMU5 477 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 RBBP8NLQ8NC74 664 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 DLG5Q8TDM6 1919 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 O00370 1275 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 SKAP2O75563 359 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 TAP1Q03518 808 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 RWDD4Q6NW29 188 aaKnown RBP13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 ANKMY2Q8IV38 441 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 MMGT1Q8N4V1 131 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 TRAPPC9Q96Q05 1148 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 POLD4Q9HCU8 107 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 HSD17B3P37058 310 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 CDH24Q86UP0 819 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 TMEM35BQ8NCS4 154 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 GLMNQ92990 594 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 PRKAG2Q9UGJ0 569 aa13.07□□□□□ -0.32
SRGAP3-202ENST00000383836 SPATA31E1Q6ZUB1 1445 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 SRP72O76094 671 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 PSMA4P25789 261 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 ANXA13P27216 316 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 HEATR4Q86WZ0 1026 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 ZFRQ96KR1 1074 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 CEP170P1Q96L14 293 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 CHP1Q99653 195 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 TRIM51Q9BSJ1 452 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 TMEM51Q9NW97 253 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 GYG1P46976 350 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 SERPINB8P50452 374 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 COASYQ13057 564 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 MTERF3Q96E29 417 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 WDR19Q8NEZ3 1342 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 NEMP1O14524 444 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 RHOBTB1O94844 696 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 ARMCX2Q7L311 632 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 RNF135Q8IUD6 432 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 CROCCP3Q8IVE0 287 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 C4orf33Q8N1A6 199 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 MAGEB18Q96M61 343 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 TMA7Q9Y2S6 64 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 PLEKHG1Q9ULL1 1385 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 ZC3H13Q5T200 1668 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 UNC13BO14795 1591 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 RPAP1Q9BWH6 1393 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 SCUBE1Q8IWY4 988 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 ZNF507Q8TCN5 953 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 SERPINB12Q96P63 405 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 ABCF3Q9NUQ8 709 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 TCN1P20061 433 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 NOA1Q8NC60 698 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 PARVAQ9NVD7 372 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 FAM95CA0A1B0GW59 222 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 USP1O94782 785 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 TBXAS1P24557 533 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 ZNF200P98182 395 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 TTC39BQ5VTQ0 682 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 KCTD1Q719H9 257 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 E5RI56 91 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 PDE8BO95263 885 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 KNOP1Q1ED39 458 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 PACS2Q86VP3 889 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 RAD54LQ92698 747 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 L2HGDHQ9H9P8 463 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 MAD2L2Q9UI95 211 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 HAO1Q9UJM8 370 aa13.06□□□□□ -0.32
SRGAP3-202ENST00000383836 RTN2O75298 545 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 HMOX2P30519 316 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 IYDQ6PHW0 289 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 RAD21L1Q9H4I0 556 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 RMI1Q9H9A7 625 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 NEU2Q9Y3R4 380 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 INO80B-WBP1J3KQ70 363 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 TOMM70O94826 608 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 GRK2P25098 689 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 LBRQ14739 615 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 COL23A1Q86Y22 540 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 KIAA0825Q8IV33 1275 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 CDKL3Q8IVW4 592 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 ASZ1Q8WWH4 475 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 INO80BQ9C086 356 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 MCM8Q9UJA3 840 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 RGS5O15539 181 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 ATP9AO75110 1047 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 OCM2P0CE71 109 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 OCMP0CE72 109 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 C19orf60Q96EN9 201 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 LRCH1Q9Y2L9 728 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 PHKA1P46020 1223 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 TMEM270Q6UE05 265 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 CCDC80Q76M96 950 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 GINS4Q9BRT9 223 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 RXFP1Q9HBX9 757 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 USE1Q9NZ43 259 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 PVALEFA0A1B0GWK0 134 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 BTDP43251 543 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms