RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
APOBEC3F-202ENST00000381565 CACNG4Q9UBN1 327 aa12.67□□□□□ -0.38
APOBEC3F-202ENST00000381565 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
APOBEC3F-202ENST00000381565 PCDHA7Q9UN72 937 aa12.67□□□□□ -0.38
APOBEC3F-202ENST00000381565 GDAQ9Y2T3 454 aa12.67□□□□□ -0.38
APOBEC3F-202ENST00000381565 SCN1AP35498 2009 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 K7ENM7 598 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 NRP1O14786 923 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 FAM13AO94988 1023 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 NMT1P30419 496 aaKnown RBP12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 STAT6P42226 847 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 NRIP1P48552 1158 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 SMTNP53814 917 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 RBM10P98175 930 aaKnown RBP12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 ATL3Q6DD88 541 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 MPZL3Q6UWV2 235 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 CCDC73Q6ZRK6 1079 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 DYMQ7RTS9 669 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 SFR1Q86XK3 245 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 RNF168Q8IYW5 571 aaPredicted RBP12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 MYCT1Q8N699 235 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 KCNG4Q8TDN1 519 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 DDX12PQ92771 950 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 TMEM169Q96HH4 297 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 PAAF1Q9BRP4 392 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 ENTPD7Q9NQZ7 604 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 FAM50BQ9Y247 325 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 MYO15AQ9UKN7 3530 aa12.66□□□□□ -0.38
APOBEC3F-202ENST00000381565 FRMD3A2A2Y4 597 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 PER2O15055 1255 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 NCK2O43639 380 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 TRAK2O60296 914 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 TBCAO75347 108 aaKnown RBP12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 PIGRP01833 764 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 KRT18P05783 430 aaKnown RBP12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 GRM5P41594 1212 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 KRT17Q04695 432 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 ADAM15Q13444 863 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 SMAD4Q13485 552 aaKnown RBP12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 KCNC3Q14003 757 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 DUSP6Q16828 381 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 RESP18Q5W5W9 173 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 PDE12Q6L8Q7 609 aaKnown RBP12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 SLC39A4Q6P5W5 647 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 ZBTB33Q86T24 672 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 DDX53Q86TM3 631 aaKnown RBP12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 RBM23Q86U06 439 aaKnown RBP12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 RNF135Q8IUD6 432 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 VPS52Q8N1B4 723 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 EFHBQ8N7U6 833 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 AUTS2Q8WXX7 1259 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 MSLNLQ96KJ4 702 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 FAM193BQ96PV7 902 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 RPS6KC1Q96S38 1066 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 IGFLR1Q9H665 355 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 ANKFY1Q9P2R3 1169 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 RCOR1Q9UKL0 485 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 TBX20Q9UMR3 447 aa12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 PRG3Q9Y2Y8 225 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3F-202ENST00000381565 DMDP11532 3685 aa12.65□□□□□ -0.39
APOBEC3F-202ENST00000381565 DOCK6Q96HP0 2047 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 CARNS1A5YM72 827 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 C2orf71A6NGG8 1288 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 FAM189A1O60320 539 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 TOM1L1O75674 476 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 MCF2P10911 925 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 OR1G1P47890 313 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 OSTNP61366 133 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 GTF2BQ00403 316 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 MCL1Q07820 350 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 STRN3Q13033 797 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 BECN1Q14457 450 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 NOLC1Q14978 699 aaKnown RBP eCLIP12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 SEZ6Q53EL9 994 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 ZC2HC1CQ53FD0 456 aaPredicted RBP12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 XKR4Q5GH76 650 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 GLRA4Q5JXX5 417 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 ZPBP2Q6X784 338 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 SV2BQ7L1I2 683 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 MAP4K3Q8IVH8 894 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 PRSS33Q8NF86 280 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 RABGGTAQ92696 567 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 STAMQ92783 540 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 SNX27Q96L92 541 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 PPP1R10Q96QC0 940 aaKnown RBP12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 STRA6Q9BX79 667 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 FGFBP2Q9BYJ0 223 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 IKZF4Q9H2S9 585 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 ST6GALNAC4Q9H4F1 302 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 ZHX3Q9H4I2 956 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 NGRNQ9NPE2 291 aaKnown RBP12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 KBTBD4Q9NVX7 518 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 CLEC1BQ9P126 229 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 PUF60Q9UHX1 559 aaKnown RBP12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 KCNG1Q9UIX4 513 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
APOBEC3F-202ENST00000381565 FAN1Q9Y2M0 1017 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms