RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 IGLV3-22A0A075B6J6 115 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 FTLP02792 175 aaPredicted RBP14.79□□□□□ -0.04
SDC1-202ENST00000381150 NR3C1P04150 777 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 ZCCHC18P0CG32 403 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 PTDSS1P48651 473 aaKnown RBP14.79□□□□□ -0.04
SDC1-202ENST00000381150 C11orf91Q3C1V1 193 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 PPP1R15BQ5SWA1 713 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 RASIP1Q5U651 963 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 SCYL3Q8IZE3 742 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 FAM20AQ96MK3 541 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 KIAA1683Q9H0B3 1180 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 ARHGEF3Q9NR81 526 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 USH1CQ9Y6N9 552 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 CLDN3O15551 220 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 UBTFL6P0CB48 400 aaPredicted RBP14.78□□□□□ -0.04
SDC1-202ENST00000381150 FERP16591 822 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 HOXA13P31271 388 aaPredicted RBP14.78□□□□□ -0.04
SDC1-202ENST00000381150 CHKAP35790 457 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 EPM2AIP1Q7L775 607 aaPredicted RBP14.78□□□□□ -0.04
SDC1-202ENST00000381150 RASGEF1CQ8N431 466 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 SLC20A1Q8WUM9 679 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 HEMGNQ9BXL5 484 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 TXLNGQ9NUQ3 528 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 GRHL1Q9NZI5 618 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 HERC5Q9UII4 1024 aaKnown RBP14.78□□□□□ -0.04
SDC1-202ENST00000381150 COL4A5P29400 1685 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 PASKQ96RG2 1323 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 hCG_2014768A0A024R1R8 64 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 SPDYE2BA6NHP3 402 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 PHF2O75151 1096 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 ECEL1O95672 775 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 PYGLP06737 847 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 SPDYE6P0CI01 402 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 COMTP21964 271 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 YY1P25490 414 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 IKQ13123 557 aaPredicted RBP14.78□□□□□ -0.04
SDC1-202ENST00000381150 LAMB3Q13751 1172 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 KNOP1Q1ED39 458 aaKnown RBP14.78□□□□□ -0.04
SDC1-202ENST00000381150 ARHGAP27Q6ZUM4 889 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 CYP4X1Q8N118 509 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 ACER1Q8TDN7 264 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 COG5Q9UP83 839 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 KIF13BQ9NQT8 1826 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 CNTNAP1P78357 1384 aa14.78□□□□□ -0.04
SDC1-202ENST00000381150 FAM187AA6NFU0 413 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 CES2O00748 559 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 DDX3YO15523 660 aaKnown RBP14.77□□□□□ -0.04
SDC1-202ENST00000381150 PYGMP11217 842 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 RAB27AP51159 221 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 ZBTB16Q05516 673 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 DHX34Q14147 1143 aaKnown RBP14.77□□□□□ -0.04
SDC1-202ENST00000381150 ZC2HC1CQ53FD0 456 aaPredicted RBP14.77□□□□□ -0.04
SDC1-202ENST00000381150 ZNF772Q68DY9 489 aaPredicted RBP14.77□□□□□ -0.04
SDC1-202ENST00000381150 DPY19L2P1Q6NXN4 242 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 BHMT2Q9H2M3 363 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 RNPEPL1Q9HAU8 725 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 EML1O00423 815 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 UNC5CO95185 931 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 LMNB1P20700 586 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 CALB2P22676 271 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 MGAT5Q09328 741 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 OVGP1Q12889 678 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 USP4Q13107 963 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 SLC15A2Q16348 729 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 LRRC8CQ8TDW0 803 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 CARD9Q9H257 536 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 VCXQ9H320 206 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 TMX2Q9Y320 296 aa14.77□□□□□ -0.04
SDC1-202ENST00000381150 CALUO43852 315 aaPredicted RBP14.77□□□□□ -0.05
SDC1-202ENST00000381150 POU5F1Q01860 360 aaKnown RBP14.77□□□□□ -0.05
SDC1-202ENST00000381150 KRT17Q04695 432 aa14.77□□□□□ -0.05
SDC1-202ENST00000381150 EDRF1Q3B7T1 1238 aa14.77□□□□□ -0.05
SDC1-202ENST00000381150 SGO2Q562F6 1265 aa14.77□□□□□ -0.05
SDC1-202ENST00000381150 ARHGEF18Q6ZSZ5 1173 aa14.77□□□□□ -0.05
SDC1-202ENST00000381150 GSTA5Q7RTV2 222 aa14.77□□□□□ -0.05
SDC1-202ENST00000381150 FAM186BQ8IYM0 893 aa14.77□□□□□ -0.05
SDC1-202ENST00000381150 MYCT1Q8N699 235 aa14.77□□□□□ -0.05
SDC1-202ENST00000381150 FAM13CQ8NE31 585 aa14.77□□□□□ -0.05
SDC1-202ENST00000381150 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.77□□□□□ -0.05
SDC1-202ENST00000381150 PARP2Q9UGN5 583 aa14.77□□□□□ -0.05
SDC1-202ENST00000381150 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.77□□□□□ -0.05
SDC1-202ENST00000381150 RBBP6Q7Z6E9 1792 aaKnown RBP14.77□□□□□ -0.05
SDC1-202ENST00000381150 KLHL33A6NCF5 533 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 RARGP13631 454 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 CHRNA3P32297 505 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 SERPINB4P48594 390 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 RPS6KA3P51812 740 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 VSTM1Q6UX27 236 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 RPUSD2Q8IZ73 545 aaKnown RBP14.76□□□□□ -0.05
SDC1-202ENST00000381150 REEP2Q9BRK0 252 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 TBC1D10AQ9BXI6 508 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 TRAF3IP3Q9Y228 551 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 STXBP5LQ9Y2K9 1186 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 TCP10L2B9ZVM9 353 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 VIL1P09327 827 aaKnown RBP14.76□□□□□ -0.05
SDC1-202ENST00000381150 RPL13P26373 211 aaKnown RBP14.76□□□□□ -0.05
SDC1-202ENST00000381150 POLD1P28340 1107 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 NMT1P30419 496 aaKnown RBP14.76□□□□□ -0.05
SDC1-202ENST00000381150 ALDH3A1P30838 453 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 SOX5P35711 763 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms