RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 K7ERI5 159 aa18.48■□□□□ 0.55
PDX1-201ENST00000381033 AGPSO00116 658 aa18.48■□□□□ 0.55
PDX1-201ENST00000381033 TNNI1P19237 187 aa18.48■□□□□ 0.55
PDX1-201ENST00000381033 GJA5P36382 358 aa18.48■□□□□ 0.55
PDX1-201ENST00000381033 MARCKSL1P49006 195 aa18.48■□□□□ 0.55
PDX1-201ENST00000381033 SNRPFP62306 86 aaKnown RBP18.48■□□□□ 0.55
PDX1-201ENST00000381033 FMO1Q01740 532 aa18.48■□□□□ 0.55
PDX1-201ENST00000381033 MKRN3Q13064 507 aaKnown RBP18.48■□□□□ 0.55
PDX1-201ENST00000381033 GJC2Q5T442 439 aaPredicted RBP18.48■□□□□ 0.55
PDX1-201ENST00000381033 CCDC70Q6NSX1 233 aa18.48■□□□□ 0.55
PDX1-201ENST00000381033 ANKRD13AQ8IZ07 590 aa18.48■□□□□ 0.55
PDX1-201ENST00000381033 HES6Q96HZ4 224 aa18.48■□□□□ 0.55
PDX1-201ENST00000381033 TMEM59LQ9UK28 342 aa18.48■□□□□ 0.55
PDX1-201ENST00000381033 ZNFX1Q9P2E3 1918 aaKnown RBP18.47■□□□□ 0.55
PDX1-201ENST00000381033 CYP11B1P15538 503 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 ARL2P36404 184 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 GGCXP38435 758 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 GPC3P51654 580 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 CAPSQ13938 189 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 IFI16Q16666 785 aaKnown RBP18.47■□□□□ 0.55
PDX1-201ENST00000381033 DDX42Q86XP3 938 aaKnown RBP eCLIP18.47■□□□□ 0.55
PDX1-201ENST00000381033 DEPTORQ8TB45 409 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 ALG3Q92685 438 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 HVCN1Q96D96 273 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 CTTNBP2NLQ9P2B4 639 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 ADAM21Q9UKJ8 722 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 AGO2Q9UKV8 859 aaKnown RBP18.47■□□□□ 0.55
PDX1-201ENST00000381033 NCANO14594 1321 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 ZNF233A6NK53 670 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 POTEJP0CG39 1038 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 KRT5P13647 590 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 RTP1P59025 263 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 LLGL1Q15334 1064 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 TDRD10Q5VZ19 366 aaKnown RBP18.47■□□□□ 0.55
PDX1-201ENST00000381033 LLGL2Q6P1M3 1020 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 PRPF31Q8WWY3 499 aaKnown RBP18.47■□□□□ 0.55
PDX1-201ENST00000381033 AMFRQ9UKV5 643 aa18.47■□□□□ 0.55
PDX1-201ENST00000381033 SPDYE5A6NIY4 337 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 DDX3YO15523 660 aaKnown RBP18.46■□□□□ 0.55
PDX1-201ENST00000381033 SRGAP2CP0DJJ0 459 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 RFX1P22670 979 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 MFAP3P55082 362 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 STRN3Q13033 797 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
PDX1-201ENST00000381033 CDR2LQ86X02 465 aaPredicted RBP18.46■□□□□ 0.55
PDX1-201ENST00000381033 TMC2Q8TDI7 906 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 CASKIN2Q8WXE0 1202 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 KRT35Q92764 455 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 GLG1Q92896 1179 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 NT5C1BQ96P26 610 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 ISCUQ9H1K1 167 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 SUCLA2Q9P2R7 463 aaPredicted RBP18.46■□□□□ 0.55
PDX1-201ENST00000381033 RNF14Q9UBS8 474 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 GARTP22102 1010 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 MCM3P25205 808 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 TNFSF9P41273 254 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 GUCY2FP51841 1108 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 INHBEP58166 350 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 TARBP2Q15633 366 aaKnown RBP18.46■□□□□ 0.55
PDX1-201ENST00000381033 TMEM130Q8N3G9 435 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 SCFD2Q8WU76 684 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 PSPC1Q8WXF1 523 aaKnown RBP18.46■□□□□ 0.55
PDX1-201ENST00000381033 CELF4Q9BZC1 486 aaKnown RBP18.46■□□□□ 0.55
PDX1-201ENST00000381033 AGTPBP1Q9UPW5 1226 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 ALG6Q9Y672 507 aa18.46■□□□□ 0.55
PDX1-201ENST00000381033 ECM2O94769 699 aaPredicted RBP18.45■□□□□ 0.54
PDX1-201ENST00000381033 CFHP08603 1231 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 ZBTB33Q86T24 672 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 OR5B17Q8NGF7 314 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 NIFKQ9BYG3 293 aaKnown RBP18.45■□□□□ 0.54
PDX1-201ENST00000381033 ZNF408Q9H9D4 720 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 AMACRQ9UHK6 382 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 A0A0G2JMZ2 1700 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 EXTL3O43909 919 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 VNN1O95497 513 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 FGGP02679 453 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 EPHX2P34913 555 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 MESDQ14696 234 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 LMBR1Q8WVP7 490 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 SEPT1Q8WYJ6 367 aa18.45■□□□□ 0.54
PDX1-201ENST00000381033 DDX1Q92499 740 aaKnown RBP18.45■□□□□ 0.54
PDX1-201ENST00000381033 UMODL1Q5DID0 1318 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 KRIT1O00522 736 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 PMM2O15305 246 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 SART1O43290 800 aaKnown RBP18.44■□□□□ 0.54
PDX1-201ENST00000381033 GRIN3BO60391 1043 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 MCCD1P59942 119 aaPredicted RBP18.44■□□□□ 0.54
PDX1-201ENST00000381033 BIRC3Q13489 604 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 GPAT2Q6NUI2 795 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 METTL7BQ6UX53 244 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 C15orf39Q6ZRI6 1047 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 ACTRT1Q8TDG2 376 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 PBKQ96KB5 322 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 FNBP1Q96RU3 617 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDX1-201ENST00000381033 GDF3Q9NR23 364 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 ZBTB42B2RXF5 422 aa18.44■□□□□ 0.54
PDX1-201ENST00000381033 PGRMC1O00264 195 aaKnown RBP18.44■□□□□ 0.54
PDX1-201ENST00000381033 CSDE1O75534 798 aaKnown RBP18.44■□□□□ 0.54
PDX1-201ENST00000381033 NAMPTP43490 491 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms