RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 YDJCA8MPS7 323 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 MSH2P43246 934 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 SHROOM1Q2M3G4 852 aaPredicted RBP13.02□□□□□ -0.32
GABPB1-203ENST00000380877 KLHL14Q9P2G3 628 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 AMACRQ9UHK6 382 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 NAGPAQ9UK23 515 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 FOXN3O00409 490 aaPredicted RBP13.02□□□□□ -0.32
GABPB1-203ENST00000380877 WNT7AO00755 349 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 WEE2P0C1S8 567 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 SAT1P21673 171 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 GARTP22102 1010 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 TMED2Q15363 201 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 PYROXD1Q8WU10 500 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 MS4A14Q96JA4 679 aa13.02□□□□□ -0.32
GABPB1-203ENST00000380877 CPSF3Q9UKF6 684 aaKnown RBP13.02□□□□□ -0.32
GABPB1-203ENST00000380877 PIK3CDO00329 1044 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 ZBTB39O15060 712 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 CLTAP09496 248 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 SRGAP2BP0DMP2 458 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 EPC2Q52LR7 807 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 CCDC137Q6PK04 289 aaKnown RBP13.02□□□□□ -0.33
GABPB1-203ENST00000380877 CDCA5Q96FF9 252 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 PRKAG2Q9UGJ0 569 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 LRRC37A3O60309 1634 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 TYW5A2RUC4 315 aaKnown RBP13.02□□□□□ -0.33
GABPB1-203ENST00000380877 ELF1P32519 619 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 SLC1A1P43005 524 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 SLC26A2P50443 739 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 SOX10P56693 466 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 VSNL1P62760 191 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 ATP11AP98196 1134 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 CCDC62Q6P9F0 684 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 CEP57Q86XR8 500 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 AFAP1L2Q8N4X5 818 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 URGCPQ8TCY9 931 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 TRAF3IP3Q9Y228 551 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 PLAAQ9Y263 795 aa13.02□□□□□ -0.33
GABPB1-203ENST00000380877 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
GABPB1-203ENST00000380877 SART1O43290 800 aaKnown RBP13.01□□□□□ -0.33
GABPB1-203ENST00000380877 TOM1L1O75674 476 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 ZNF484Q5JVG2 852 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 ZNF507Q8TCN5 953 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 C1orf54Q8WWF1 131 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 LRRC1Q9BTT6 524 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 TAF1DQ9H5J8 278 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-203ENST00000380877 TTC7AQ9ULT0 858 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-203ENST00000380877 FRMPD4Q14CM0 1322 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 TMEM150BA6NC51 233 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 FAM187AA6NFU0 413 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 CSPG5O95196 566 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 SNHG28P0DPA3 235 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 NR1D1P20393 614 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 SREBF2Q12772 1141 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 MYBPC2Q14324 1141 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 IL17AQ16552 155 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 RWDD4Q6NW29 188 aaKnown RBP13.01□□□□□ -0.33
GABPB1-203ENST00000380877 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 RAB3IL1Q8TBN0 382 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 TNFRSF25Q93038 417 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 RILPQ96NA2 401 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 GPBP1L1Q9HC44 474 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-203ENST00000380877 BMP6P22004 513 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 GARSP41250 739 aaKnown RBP13.01□□□□□ -0.33
GABPB1-203ENST00000380877 ALDH5A1P51649 535 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-203ENST00000380877 LRRC8CQ8TDW0 803 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 WDR18Q9BV38 432 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 CYP3A7-CYP3A51PA0A087WV96 503 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 PDHXO00330 501 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 ONECUT3O60422 494 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-203ENST00000380877 RPS6KA5O75582 802 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 CYP3A7P24462 503 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 CPT1AP50416 773 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 BCAR1P56945 870 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 IL9RQ01113 521 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 AFG1LQ8WV93 481 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 UBE2Q2Q8WVN8 375 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 GOLPH3Q9H4A6 298 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 SAYSD1Q9NPB0 183 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 DDX56Q9NY93 547 aaKnown RBP13.01□□□□□ -0.33
GABPB1-203ENST00000380877 WDR35Q9P2L0 1181 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 KCNH4Q9UQ05 1017 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 TACC3Q9Y6A5 838 aa13.01□□□□□ -0.33
GABPB1-203ENST00000380877 RGS2P41220 211 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 SLC12A3P55017 1021 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 STILQ15468 1287 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 LY6KQ17RY6 165 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 VSIG10LQ86VR7 867 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 FAF2Q96CS3 445 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 KLC2Q9H0B6 622 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 CPA4Q9UI42 421 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 MAGED2Q9UNF1 606 aaPredicted RBP13□□□□□ -0.33
GABPB1-203ENST00000380877 PSMC4P43686 418 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 CDH6P55285 790 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 CATSPERGQ6ZRH7 1159 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 USP50Q70EL3 339 aaPredicted RBP13□□□□□ -0.33
GABPB1-203ENST00000380877 TARSL2A2RTX5 802 aaKnown RBP13□□□□□ -0.33
GABPB1-203ENST00000380877 ATMINO43313 823 aaPredicted RBP13□□□□□ -0.33
GABPB1-203ENST00000380877 PSMD10O75832 226 aa13□□□□□ -0.33
GABPB1-203ENST00000380877 ATP8B4Q8TF62 1192 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms