RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TSEN2Q8NCE0 465 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 CXorf56Q9H5V9 222 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 ASNSD1Q9NWL6 643 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 USH1CQ9Y6N9 552 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 WNT7AO00755 349 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 KIF3CO14782 793 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 LPXNO60711 386 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 DIAPH2O60879 1101 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 CAND2O75155 1236 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 STXBP2Q15833 593 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 COL23A1Q86Y22 540 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 SULF1Q8IWU6 871 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 HACE1Q8IYU2 909 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 RTKN2Q8IZC4 609 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 C4orf33Q8N1A6 199 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 TTLL6Q8N841 843 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 C18orf8Q96DM3 657 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 EHD4Q9H223 541 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 DDX56Q9NY93 547 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 RNF225M0QZC1 329 aaPredicted RBP13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 FNTAP49354 379 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 ITGA8P53708 1063 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 ERVK-9P63128 1117 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 MRPS9P82933 396 aaKnown RBP13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 AMPD2Q01433 879 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 PLCB4Q15147 1175 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 RHPN2Q8IUC4 686 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 TLK1Q9UKI8 766 aa13.49□□□□□ -0.25
DNMT3A-204ENST00000380756 A0A0A6YYK5 440 aaPredicted RBP13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 WTIPA6NIX2 430 aaPredicted RBP13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 ARHGEF6Q15052 776 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 EPC2Q52LR7 807 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 KCNK18Q7Z418 384 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 ANKMY2Q8IV38 441 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 PSPC1Q8WXF1 523 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 ERP27Q96DN0 273 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 FAM118BQ9BPY3 351 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 G3BP2Q9UN86 482 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 NEU2Q9Y3R4 380 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 EIF4E1BA6NMX2 242 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 F8VZ95 297 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 XPOTO43592 962 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 ENTPD3O75355 529 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 DGAT1O75907 488 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 ACOT2P49753 483 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 NFIAQ12857 509 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 KIF2BQ8N4N8 673 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 HIPK4Q8NE63 616 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 SLC16A10Q8TF71 515 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 TSC22D3Q99576 134 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 FOXP3Q9BZS1 431 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 YIPF3Q9GZM5 350 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 SLC24A3Q9HC58 644 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 TMEM8AQ9HCN3 771 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 VCX3AQ9NNX9 186 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 CACNA1FO60840 1977 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 GOLGA8RI6L899 631 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 ZNF568Q3ZCX4 644 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 GSDMBQ8TAX9 411 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 NLRP7Q8WX94 980 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 SPDL1Q96EA4 605 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 PPP1R16BQ96T49 567 aa13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 ALG13Q9NP73 1137 aaKnown RBP13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 MAGED2Q9UNF1 606 aaPredicted RBP13.48□□□□□ -0.25
DNMT3A-204ENST00000380756 DLG5Q8TDM6 1919 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 SYF2O95926 243 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 GSTA1P08263 222 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 GSTA2P09210 222 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 RARGP13631 454 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 SREBF1P36956 1147 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 IFRD2Q12894 506 aaPredicted RBP13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 IL17AQ16552 155 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 GRAMD1BQ3KR37 738 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 HSP90AA5PQ58FG0 334 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 RCOR2Q8IZ40 523 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 DCPSQ96C86 337 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 RPS6KC1Q96S38 1066 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 CYP26B1Q9NR63 512 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 SIGLEC1Q9BZZ2 1709 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 GTPBP10A4D1E9 387 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 CLGNO14967 610 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 EPHB6O15197 1021 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 MYBL2P10244 700 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 MAGEA4P43358 317 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 BCAR1P56945 870 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 PSMC6P62333 389 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 DUOXA2Q1HG44 320 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 CAPRIN2Q6IMN6 1127 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 MXRA8Q9BRK3 442 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 SNX25Q9H3E2 840 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 VCPKMTQ9H867 229 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 CD248Q9HCU0 757 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 ZNF302Q9NR11 478 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 REXO2Q9Y3B8 237 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 MST1RQ04912 1400 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 LOC102724159A0A0B4J2E5 919 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 COG7P83436 770 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 FUT2Q10981 343 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 PWP2Q15269 919 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms