RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 PARP2Q9UGN5 583 aa19.28■□□□□ 0.68
HMGN1-203ENST00000380748 DDX25Q9UHL0 483 aaKnown RBP19.28■□□□□ 0.68
HMGN1-203ENST00000380748 MRPS23Q9Y3D9 190 aaKnown RBP19.28■□□□□ 0.68
HMGN1-203ENST00000380748 P4HBP07237 508 aaKnown RBP19.27■□□□□ 0.68
HMGN1-203ENST00000380748 NCBP1Q09161 790 aaKnown RBP19.27■□□□□ 0.68
HMGN1-203ENST00000380748 PPP2R5CQ13362 524 aa19.27■□□□□ 0.68
HMGN1-203ENST00000380748 TUSC3Q13454 348 aa19.27■□□□□ 0.68
HMGN1-203ENST00000380748 Q6ZUG5 572 aa19.27■□□□□ 0.68
HMGN1-203ENST00000380748 MTRQ99707 1265 aa19.27■□□□□ 0.68
HMGN1-203ENST00000380748 LXNQ9BS40 222 aa19.27■□□□□ 0.68
HMGN1-203ENST00000380748 XPNPEP1Q9NQW7 623 aa19.27■□□□□ 0.68
HMGN1-203ENST00000380748 RALGAPA1Q6GYQ0 2036 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 ZBTB39O15060 712 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 DKC1O60832 514 aaKnown RBP eCLIP19.26■□□□□ 0.67
HMGN1-203ENST00000380748 CEBPBP17676 345 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 YWHABP31946 246 aaKnown RBP19.26■□□□□ 0.67
HMGN1-203ENST00000380748 GRM2Q14416 872 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 XKR9Q5GH70 373 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 MOXD1Q6UVY6 613 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 IFNLR1Q8IU57 520 aaPredicted RBP19.26■□□□□ 0.67
HMGN1-203ENST00000380748 ASAP3Q8TDY4 903 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 DNASE1L2Q92874 299 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 C22orf23Q9BZE7 217 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 SLKQ9H2G2 1235 aaPredicted RBP19.26■□□□□ 0.67
HMGN1-203ENST00000380748 SH3GLB2Q9NR46 395 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 ANGPTL2Q9UKU9 493 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 PCDHA4Q9UN74 947 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 ZMYM2Q9UBW7 1377 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 ZZEF1O43149 2961 aa19.26■□□□□ 0.67
HMGN1-203ENST00000380748 COL4A2P08572 1712 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 M0R2N6 131 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 RHOP08100 348 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 FCARP24071 287 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 OR1D2P34982 312 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 DMWDQ09019 674 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 SRSF5Q13243 272 aaKnown RBP19.25■□□□□ 0.67
HMGN1-203ENST00000380748 CAPSQ13938 189 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 RAB33AQ14088 237 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 SIM2Q14190 667 aaPredicted RBP19.25■□□□□ 0.67
HMGN1-203ENST00000380748 KRT32Q14532 448 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 MXD4Q14582 209 aaPredicted RBP19.25■□□□□ 0.67
HMGN1-203ENST00000380748 PPP2R5DQ14738 602 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 CSRP2Q16527 193 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 UVSSAQ2YD98 709 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 SLC27A1Q6PCB7 646 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 C4orf19Q8IY42 314 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 ELSPBP1Q96BH3 223 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 GDE1Q9NZC3 331 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 RGL1Q9NZL6 768 aa19.25■□□□□ 0.67
HMGN1-203ENST00000380748 ZFYVE26Q68DK2 2539 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 MAN2B1O00754 1011 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 NRG2O14511 850 aaPredicted RBP19.24■□□□□ 0.67
HMGN1-203ENST00000380748 HRO43593 1189 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 HMGB1P09429 215 aaKnown RBP19.24■□□□□ 0.67
HMGN1-203ENST00000380748 IFNAR1P17181 557 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 PMLP29590 882 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 CCR3P51677 355 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 SATB1Q01826 763 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 TFDP1Q14186 410 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 MAMSTRQ6ZN01 415 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 CXCL16Q9H2A7 254 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 BRD9Q9H8M2 597 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 LMAN1LQ9HAT1 526 aa19.24■□□□□ 0.67
HMGN1-203ENST00000380748 NCOA5Q9HCD5 579 aaKnown RBP19.24■□□□□ 0.67
HMGN1-203ENST00000380748 PTGESO14684 152 aa19.23■□□□□ 0.67
HMGN1-203ENST00000380748 COL9A2Q14055 689 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-203ENST00000380748 CTTNQ14247 550 aaKnown RBP19.23■□□□□ 0.67
HMGN1-203ENST00000380748 NPY5RQ15761 445 aa19.23■□□□□ 0.67
HMGN1-203ENST00000380748 INF2Q27J81 1249 aa19.23■□□□□ 0.67
HMGN1-203ENST00000380748 N4BP2L1Q5TBK1 243 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-203ENST00000380748 OTUD6AQ7L8S5 288 aa19.23■□□□□ 0.67
HMGN1-203ENST00000380748 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-203ENST00000380748 BLIDQ8IZY5 108 aa19.23■□□□□ 0.67
HMGN1-203ENST00000380748 FAM3CQ92520 227 aa19.23■□□□□ 0.67
HMGN1-203ENST00000380748 DYDC2Q96IM9 177 aa19.23■□□□□ 0.67
HMGN1-203ENST00000380748 IER2Q9BTL4 223 aa19.23■□□□□ 0.67
HMGN1-203ENST00000380748 KCNMB3Q9NPA1 279 aa19.23■□□□□ 0.67
HMGN1-203ENST00000380748 TICRRQ7Z2Z1 1910 aa19.23■□□□□ 0.67
HMGN1-203ENST00000380748 ASPMQ8IZT6 3477 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 SPEGQ15772 3267 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 A0A1B0GUA9 196 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 CHURC1-FNTBB4DL54 471 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 IGFBP6P24592 240 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-203ENST00000380748 FNTBP49356 437 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 CCT2P78371 535 aaKnown RBP19.22■□□□□ 0.67
HMGN1-203ENST00000380748 CYP4A11Q02928 519 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 POU5F1BQ06416 359 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 GAS6Q14393 721 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 EPHA7Q15375 998 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 PDXDC1Q6P996 788 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-203ENST00000380748 FAM20AQ96MK3 541 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 MTRRQ9UBK8 725 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 CDY1Q9Y6F8 540 aa19.22■□□□□ 0.67
HMGN1-203ENST00000380748 GLRA2P23416 452 aa19.21■□□□□ 0.67
HMGN1-203ENST00000380748 CXCL12P48061 93 aa19.21■□□□□ 0.67
HMGN1-203ENST00000380748 ELAVL2Q12926 359 aaKnown RBP19.21■□□□□ 0.67
HMGN1-203ENST00000380748 NAB2Q15742 525 aa19.21■□□□□ 0.67
HMGN1-203ENST00000380748 FAM78AQ5JUQ0 283 aa19.21■□□□□ 0.67
HMGN1-203ENST00000380748 NCAPH2Q6IBW4 605 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms