RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 ANKFY1Q9P2R3 1169 aa6.77□□□□□ -1.32
FOCAD-202ENST00000380249 NFE2L3Q9Y4A8 694 aa6.77□□□□□ -1.32
FOCAD-202ENST00000380249 PCDHB7Q9Y5E2 793 aa6.77□□□□□ -1.32
FOCAD-202ENST00000380249 LRRC10BA6NIK2 292 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 CCP110O43303 1012 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 BMP6P22004 513 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 SNRNP35Q16560 246 aaKnown RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 DUOXA2Q1HG44 320 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 BEST2Q8NFU1 509 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 SPATA18Q8TC71 538 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 RNPC3Q96LT9 517 aaKnown RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 MFSD14AQ96MC6 490 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 ZNF560Q96MR9 790 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 TMEM175Q9BSA9 504 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 FRMPD3Q5JV73 1810 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 TMEM189-UBE2V1I3L0A0 370 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 NPTXRO95502 500 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 C1RP00736 705 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 ATP2A2P16615 1042 aaKnown RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 ATF7P17544 494 aaPredicted RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 LRPAP1P30533 357 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 DPCR1Q3MIW9 517 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 KLHL10Q6JEL2 608 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 LRRC52Q8N7C0 313 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 FAM193BQ96PV7 902 aaPredicted RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 FUCA2Q9BTY2 467 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 IMPG2Q9BZV3 1241 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 RBAKQ9NYW8 714 aaPredicted RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 GTPBP10A4D1E9 387 aaKnown RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 H0YGN5 161 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 STAU1O95793 577 aaKnown RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 THP07101 528 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 ADSSP30520 456 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 HTRA4P83105 476 aaPredicted RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 NOMO2Q5JPE7 1267 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 WDR49Q8IV35 697 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 CRIPAKQ8N1N5 446 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 CBWD1Q9BRT8 395 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 INTS13Q9NVM9 706 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 PARP2Q9UGN5 583 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 NCOR1O75376 2440 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 RECQL4O94761 1208 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 TNNC2P02585 160 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 TMEM191BP0C7N4 346 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 SP7Q8TDD2 431 aaPredicted RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 PARD3BQ8TEW8 1205 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 PPP1R13LQ8WUF5 828 aa6.77□□□□□ -1.33
FOCAD-202ENST00000380249 TRIP12Q14669 1992 aaPredicted RBP6.77□□□□□ -1.33
FOCAD-202ENST00000380249 ZC3H11AO75152 810 aaKnown RBP eCLIP6.76□□□□□ -1.33
FOCAD-202ENST00000380249 ZSCAN23Q3MJ62 389 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 AGMOQ6ZNB7 445 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 ZNF668Q96K58 619 aaPredicted RBP6.76□□□□□ -1.33
FOCAD-202ENST00000380249 PPP1R16BQ96T49 567 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 RC3H2Q9HBD1 1191 aaKnown RBP6.76□□□□□ -1.33
FOCAD-202ENST00000380249 PUF60Q9UHX1 559 aaKnown RBP6.76□□□□□ -1.33
FOCAD-202ENST00000380249 MSRAQ9UJ68 235 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 SMIM28A0A1B0GU29 152 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 SYCE3A1L190 88 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 KIF2AO00139 706 aaPredicted RBP6.76□□□□□ -1.33
FOCAD-202ENST00000380249 HOXD13P35453 343 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 DSC1Q08554 894 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 BTG3Q14201 252 aaPredicted RBP6.76□□□□□ -1.33
FOCAD-202ENST00000380249 SLC39A4Q6P5W5 647 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 C16orf59Q7L2K0 433 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 TDHQ8IZJ6 230 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 FIBCD1Q8N539 461 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 CGRRF1Q99675 332 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 COLEC11Q9BWP8 271 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 PLVAPQ9BX97 442 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 CNTN3Q9P232 1028 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 DOCK5Q9H7D0 1870 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 ANKRD63C9JTQ0 380 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 SYN1P17600 705 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 FILIP1LQ4L180 1135 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 KRT39Q6A163 491 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 DPH6Q7L8W6 267 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 TRIM59Q8IWR1 403 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 LINC01599Q8WXQ3 324 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 SNX27Q96L92 541 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 SEMA6BQ9H3T3 888 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 CSDE1O75534 798 aaKnown RBP6.76□□□□□ -1.33
FOCAD-202ENST00000380249 DGKIO75912 1065 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 RBP5P82980 135 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 CYP24A1Q07973 514 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 BFSP1Q12934 665 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 MAN2A1Q16706 1144 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 SLC10A6Q3KNW5 377 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 ANKRD40Q6AI12 368 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 OTOP2Q7RTS6 562 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 RTN4RL1Q86UN2 441 aaPredicted RBP6.76□□□□□ -1.33
FOCAD-202ENST00000380249 PPP2R3CQ969Q6 453 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 YME1L1Q96TA2 773 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 GAD1Q99259 594 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 COQ4Q9Y3A0 265 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 TET1Q8NFU7 2136 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 KIF4AO95239 1232 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 TRIM21P19474 475 aaKnown RBP6.76□□□□□ -1.33
FOCAD-202ENST00000380249 ATICP31939 592 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 MXI1P50539 228 aa6.76□□□□□ -1.33
FOCAD-202ENST00000380249 CYP2J2P51589 502 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms