RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 VPS18Q9P253 973 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 TRAF3IP3Q9Y228 551 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 TELO2Q9Y4R8 837 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 COL4A3BPQ9Y5P4 624 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 MBLAC1A4D2B0 266 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 RRN3P2A6NIE6 340 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 CES2O00748 559 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 IDEP14735 1019 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 CCND3P30281 292 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 APBA1Q02410 837 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 MAPK7Q13164 816 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 NAB2Q15742 525 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 FSCN1Q16658 493 aaKnown RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 EDRF1Q3B7T1 1238 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 TMEM63BQ5T3F8 832 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 MEI1Q5TIA1 1274 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 IRF2BP2Q7Z5L9 587 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 LRRC57Q8N9N7 239 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 KAT2BQ92831 832 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 MRRFQ96E11 262 aaKnown RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 NFKBIZQ9BYH8 718 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 TMEM51Q9NW97 253 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 EHD2Q9NZN4 543 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 SAMM50Q9Y512 469 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 TRIM17Q9Y577 477 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 MCM3P25205 808 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 CYP4A11Q02928 519 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 NFIL3Q16649 462 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 PRAMEF19Q5SWL8 479 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 DYMQ7RTS9 669 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 MREGQ8N565 214 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 SLC43A3Q8NBI5 491 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 PCSK9Q8NBP7 692 aaKnown RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 TSEN2Q8NCE0 465 aaKnown RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 KIFAP3Q92845 792 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 BHMT2Q9H2M3 363 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 FAM207AQ9NSI2 230 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 FEZ2Q9UHY8 353 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 FBXL5Q9UKA1 691 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 AJAP1Q9UKB5 411 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 OGDHLQ9ULD0 1010 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 PHF24Q9UPV7 400 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 MACROD2A1Z1Q3 448 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 BACH1O14867 736 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 EIF3DO15371 548 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDKL5-202ENST00000379996 MAGEB2O15479 319 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 TLL1O43897 1013 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 ARL2P36404 184 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 GGCXP38435 758 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 SNRPFP62306 86 aaKnown RBP8.37□□□□□ -1.07
CDKL5-202ENST00000379996 LRRC41Q15345 812 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 FKBP15Q5T1M5 1219 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 KIAA1328Q86T90 577 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 SRLQ86TD4 932 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 GPBP1Q86WP2 473 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 MYOCDQ8IZQ8 938 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 RASSF8Q8NHQ8 419 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 DRC1Q96MC2 740 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 FAM161BQ96MY7 647 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 FIZ1Q96SL8 496 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 MTG1Q9BT17 334 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-202ENST00000379996 FAM204AQ9H8W3 233 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 SPC25Q9HBM1 224 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 NRCAMQ92823 1304 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 NPHP3-ACAD11A0A0J9YXS1 232 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 ARHGEF35A5YM69 484 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 NCK2O43639 380 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 SERPING1P05155 500 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 NCKAP1LP55160 1127 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 FKBP3Q00688 224 aaKnown RBP8.37□□□□□ -1.07
CDKL5-202ENST00000379996 KIF5AQ12840 1032 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 TRIM32Q13049 653 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 NNTQ13423 1086 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 PRPF38BQ5VTL8 546 aaKnown RBP8.37□□□□□ -1.07
CDKL5-202ENST00000379996 CCDC65Q8IXS2 484 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 ANKLE1Q8NAG6 615 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 RIN2Q8WYP3 895 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-202ENST00000379996 ZNF333Q96JL9 665 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 CAPZA3Q96KX2 299 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 CCDC42Q96M95 316 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 RUSC1Q9BVN2 902 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 ATP6V0A4Q9HBG4 840 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 PLCB1Q9NQ66 1216 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 ZNHIT6Q9NWK9 470 aaKnown RBP8.37□□□□□ -1.07
CDKL5-202ENST00000379996 SMARCAL1Q9NZC9 954 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 STXBP5LQ9Y2K9 1186 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 HYOU1Q9Y4L1 999 aa8.37□□□□□ -1.07
CDKL5-202ENST00000379996 H3BRB1 525 aa8.36□□□□□ -1.07
CDKL5-202ENST00000379996 C22orf31O95567 290 aa8.36□□□□□ -1.07
CDKL5-202ENST00000379996 ELNP15502 786 aa8.36□□□□□ -1.07
CDKL5-202ENST00000379996 TCP1P17987 556 aaKnown RBP8.36□□□□□ -1.07
CDKL5-202ENST00000379996 PRKCIP41743 596 aa8.36□□□□□ -1.07
CDKL5-202ENST00000379996 CDC42EP1Q00587 391 aa8.36□□□□□ -1.07
CDKL5-202ENST00000379996 SLC18A3Q16572 532 aa8.36□□□□□ -1.07
CDKL5-202ENST00000379996 LINC01559Q495D7 138 aa8.36□□□□□ -1.07
CDKL5-202ENST00000379996 TTMPQ5BVD1 217 aa8.36□□□□□ -1.07
CDKL5-202ENST00000379996 C1orf53Q5VUE5 145 aa8.36□□□□□ -1.07
CDKL5-202ENST00000379996 TCP11Q8WWU5 503 aa8.36□□□□□ -1.07
CDKL5-202ENST00000379996 CCDC47Q96A33 483 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms