RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CARNS1A5YM72 827 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 EPOPA6NHQ4 379 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 H3BNC9 293 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 EXTL3O43909 919 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 MBD3O95983 291 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 GALTP07902 379 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 CXCL8P10145 99 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 BMP6P22004 513 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 CTNNB1P35222 781 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 PRCPP42785 496 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 BCAR1P56945 870 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 KCNT2Q6UVM3 1135 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 Q7L0L9 218 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 CD302Q8IX05 232 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 SMYD4Q8IYR2 804 aaPredicted RBP20.41■□□□□ 0.86
SSU72-203ENST00000378725 DEFB123Q8N688 67 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 ZSWIM2Q8NEG5 633 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 FBXO22Q8NEZ5 403 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 FBXL18Q96ME1 805 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 ZMAT2Q96NC0 199 aaKnown RBP20.41■□□□□ 0.86
SSU72-203ENST00000378725 ZNF558Q96NG5 402 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 FAM193BQ96PV7 902 aaPredicted RBP20.41■□□□□ 0.86
SSU72-203ENST00000378725 PPP1R10Q96QC0 940 aaKnown RBP20.41■□□□□ 0.86
SSU72-203ENST00000378725 TSPAN18Q96SJ8 248 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 NUP62CLQ9H1M0 184 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 DMAC2Q9NW81 257 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 HSPBP1Q9NZL4 362 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 DNAJB4Q9UDY4 337 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 MTUS1Q9ULD2 1270 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 MAPK8IP1Q9UQF2 711 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 TRAF3IP3Q9Y228 551 aa20.41■□□□□ 0.86
SSU72-203ENST00000378725 LACTBL1A8MY62 500 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 CLIC2O15247 247 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 ALDH2P05091 517 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 ALDH7A1P49419 539 aaKnown RBP20.4■□□□□ 0.86
SSU72-203ENST00000378725 SLC9A9Q8IVB4 645 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 ADSSL1Q8N142 457 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 GPD1LQ8N335 351 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 TRIML1Q8N9V2 468 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 SAAL1Q96ER3 474 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 FAM213AQ9BRX8 229 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 KIAA1586Q9HCI6 787 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 MTMR10Q9NXD2 777 aa20.4■□□□□ 0.86
SSU72-203ENST00000378725 ZC3H11AO75152 810 aaKnown RBP eCLIP20.39■□□□□ 0.85
SSU72-203ENST00000378725 SLC11A1P49279 550 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 TUSC3Q13454 348 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 MYBPC2Q14324 1141 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 ZBTB6Q15916 424 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 NFIL3Q16649 462 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 ISM2Q6H9L7 571 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 SLC39A11Q8N1S5 342 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 KLHL23Q8NBE8 558 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 FAM161BQ96MY7 647 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 C11orf84Q9BUA3 381 aaPredicted RBP20.39■□□□□ 0.85
SSU72-203ENST00000378725 PRDM12Q9H4Q4 367 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 ASB7Q9H672 318 aa20.39■□□□□ 0.85
SSU72-203ENST00000378725 GOLGA8IPA6NC78 632 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 GOLGA8JA6NMD2 632 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 RFXAPO00287 272 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 NRP1O14786 923 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 CALUO43852 315 aaPredicted RBP20.38■□□□□ 0.85
SSU72-203ENST00000378725 LPXNO60711 386 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 PBX3P40426 434 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 PLCB3Q01970 1234 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 PPP2R3AQ06190 1150 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 GPM6BQ13491 265 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 ZCWPW2Q504Y3 356 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 GLRA4Q5JXX5 417 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 CENPPQ6IPU0 288 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 XXYLT1Q8NBI6 393 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 SLC38A7Q9NVC3 462 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 SPG21Q9NZD8 308 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 FAN1Q9Y2M0 1017 aa20.38■□□□□ 0.85
SSU72-203ENST00000378725 LAMA2P24043 3122 aaKnown RBP20.38■□□□□ 0.85
SSU72-203ENST00000378725 ZNF233A6NK53 670 aa20.37■□□□□ 0.85
SSU72-203ENST00000378725 BIN1O00499 593 aa20.37■□□□□ 0.85
SSU72-203ENST00000378725 FGF18O76093 207 aa20.37■□□□□ 0.85
SSU72-203ENST00000378725 ITGB1P05556 798 aa20.37■□□□□ 0.85
SSU72-203ENST00000378725 PPM1AP35813 382 aa20.37■□□□□ 0.85
SSU72-203ENST00000378725 PPP1R2P41236 205 aa20.37■□□□□ 0.85
SSU72-203ENST00000378725 HSP90AA2PQ14568 343 aaPredicted RBP20.37■□□□□ 0.85
SSU72-203ENST00000378725 BRSK2Q8IWQ3 736 aa20.37■□□□□ 0.85
SSU72-203ENST00000378725 SPPL3Q8TCT6 385 aa20.37■□□□□ 0.85
SSU72-203ENST00000378725 GUCD1Q96NT3 240 aa20.37■□□□□ 0.85
SSU72-203ENST00000378725 CDX2Q99626 313 aaPredicted RBP20.37■□□□□ 0.85
SSU72-203ENST00000378725 DERAQ9Y315 318 aa20.37■□□□□ 0.85
SSU72-203ENST00000378725 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.37■□□□□ 0.85
SSU72-203ENST00000378725 PPP1R3GB7ZBB8 358 aa20.36■□□□□ 0.85
SSU72-203ENST00000378725 NT5C1B-RDH14C9J2C7 533 aa20.36■□□□□ 0.85
SSU72-203ENST00000378725 IL18RAPO95256 599 aa20.36■□□□□ 0.85
SSU72-203ENST00000378725 NR3C1P04150 777 aa20.36■□□□□ 0.85
SSU72-203ENST00000378725 CD44P16070 742 aaKnown RBP20.36■□□□□ 0.85
SSU72-203ENST00000378725 POU3F3P20264 500 aaPredicted RBP20.36■□□□□ 0.85
SSU72-203ENST00000378725 OR1G1P47890 313 aa20.36■□□□□ 0.85
SSU72-203ENST00000378725 CYP2J2P51589 502 aa20.36■□□□□ 0.85
SSU72-203ENST00000378725 SOX4Q06945 474 aaPredicted RBP20.36■□□□□ 0.85
SSU72-203ENST00000378725 RBM43Q6ZSC3 357 aaKnown RBP20.36■□□□□ 0.85
SSU72-203ENST00000378725 CBWD2Q8IUF1 395 aa20.36■□□□□ 0.85
SSU72-203ENST00000378725 DHTKD1Q96HY7 919 aaPredicted RBP20.36■□□□□ 0.85
SSU72-203ENST00000378725 IGSF21Q96ID5 467 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms