RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 MMGT1Q8N4V1 131 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 CHST13Q8NET6 341 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 FAF2Q96CS3 445 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 ACAP3Q96P50 834 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 STAP1Q9ULZ2 295 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 BMP6P22004 513 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 PRKCEQ02156 737 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 RHOT1Q8IXI2 618 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 ANKRD13AQ8IZ07 590 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 MCUQ8NE86 351 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 L1RE1Q9UN81 338 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 DYNC1LI2O43237 492 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-201ENST00000378156 PPP1R37O75864 691 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 CSPG5O95196 566 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 IL1R1P14778 569 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 CYP11B2P19099 503 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-201ENST00000378156 SNRNP35Q16560 246 aaKnown RBP15.93■□□□□ 0.14
NPHP4-201ENST00000378156 KLHDC7AQ5VTJ3 777 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 PRPF31Q8WWY3 499 aaKnown RBP15.93■□□□□ 0.14
NPHP4-201ENST00000378156 RUBCNQ92622 972 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 WNT8AQ9H1J5 351 aa15.93■□□□□ 0.14
NPHP4-201ENST00000378156 RGL2O15211 777 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 TMCO4Q5TGY1 634 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 HDAC11Q96DB2 347 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 EIF2AQ9BY44 585 aaKnown RBP15.92■□□□□ 0.14
NPHP4-201ENST00000378156 SPDYE2BA6NHP3 402 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 GRIN3BO60391 1043 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 TFRCP02786 760 aaKnown RBP15.92■□□□□ 0.14
NPHP4-201ENST00000378156 SPDYE6P0CI01 402 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 ARL4CP56559 192 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 MDM2Q00987 491 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-201ENST00000378156 LRRC14Q15048 493 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 HP1BP3Q5SSJ5 553 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-201ENST00000378156 ZIM3Q96PE6 472 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 RASA4BC9J798 803 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 RASA4O43374 803 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 DCTN3O75935 186 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 TAAR1Q96RJ0 339 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 POLR3CQ9BUI4 534 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-201ENST00000378156 EHD4Q9H223 541 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 WDR70Q9NW82 654 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 SIGLEC1Q9BZZ2 1709 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 SLC4A1P02730 911 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 ICAM1P05362 532 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 EMC2Q15006 297 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 ZNF449Q6P9G9 518 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 CFAP36Q96G28 342 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 PITPNM3Q9BZ71 974 aa15.92■□□□□ 0.14
NPHP4-201ENST00000378156 ZBTB22O15209 634 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 MAGEB2O15479 319 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 APOEP02649 317 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 FGFR4P22455 802 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 NPEPPSP55786 919 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 FAM102AQ5T9C2 384 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-201ENST00000378156 CENPPQ6IPU0 288 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 SLC30A5Q8TAD4 765 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 SLC4A9Q96Q91 983 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 LRRIQ3A6PVS8 624 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-201ENST00000378156 GOLGA8MH3BSY2 632 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 MSH4O15457 936 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 GH1P01241 217 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 ESRRAP11474 423 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-201ENST00000378156 SCP2P22307 547 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 CDC42EP1Q00587 391 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 SCFD2Q8WU76 684 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 ZNF560Q96MR9 790 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 CACYBPQ9HB71 228 aaKnown RBP15.91■□□□□ 0.14
NPHP4-201ENST00000378156 KIF1CO43896 1103 aaKnown RBP15.91■□□□□ 0.14
NPHP4-201ENST00000378156 STX1BP61266 288 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 PPWD1Q96BP3 646 aaKnown RBP15.91■□□□□ 0.14
NPHP4-201ENST00000378156 SERPINI1Q99574 410 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 ANKEF1Q9NU02 776 aa15.91■□□□□ 0.14
NPHP4-201ENST00000378156 FNDC3AQ9Y2H6 1198 aaKnown RBP15.91■□□□□ 0.14
NPHP4-201ENST00000378156 RTN2O75298 545 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 MED24O75448 989 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 DHX34Q14147 1143 aaKnown RBP15.9■□□□□ 0.14
NPHP4-201ENST00000378156 KRT80Q6KB66 452 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 USP38Q8NB14 1042 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 PARK7Q99497 189 aaKnown RBP15.9■□□□□ 0.14
NPHP4-201ENST00000378156 MKNK1Q9BUB5 465 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 ARHGAP20Q9P2F6 1191 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 KLHL8Q9P2G9 620 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-201ENST00000378156 DDTLA6NHG4 134 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-201ENST00000378156 RSPH10B2B2RC85 870 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 EIF3DO15371 548 aaKnown RBP eCLIP15.9■□□□□ 0.14
NPHP4-201ENST00000378156 RSPH10BP0C881 870 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 RFC5P40937 340 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 EPHB1P54762 984 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-201ENST00000378156 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.9■□□□□ 0.14
NPHP4-201ENST00000378156 KIAA1755Q5JYT7 1200 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 RICTORQ6R327 1708 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 DCLK2Q8N568 766 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 ZKSCAN4Q969J2 545 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-201ENST00000378156 NUDCD1Q96RS6 583 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 TTC1Q99614 292 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 ANKZF1Q9H8Y5 726 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 PARVAQ9NVD7 372 aa15.9■□□□□ 0.14
NPHP4-201ENST00000378156 IQANK1A0A1B0GTG1 560 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms