RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 RFX1P22670 979 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 CHRNA3P32297 505 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 GBP1P32455 592 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 LACTBP83111 547 aaPredicted RBP17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 OTUD6AQ7L8S5 288 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 CHURC1Q8WUH1 139 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 CNKSR1Q969H4 720 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 SLX4Q8IY92 1834 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 SYNGAP1Q96PV0 1343 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 CLRN2A0PK11 232 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 RARGP13631 454 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 HADHBP55084 474 aaKnown RBP17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 TBC1D10BQ4KMP7 808 aaPredicted RBP17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 ANKRD20A2Q5SQ80 823 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 C1orf220Q5T0J3 134 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 ANKRD20A1Q5TYW2 823 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 ANKRD20A3Q5VUR7 823 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 TTC27Q6P3X3 843 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 MIER3Q7Z3K6 550 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 PLEKHO2Q8TD55 490 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 ZSWIM1Q9BR11 485 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 MXRA8Q9BRK3 442 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 ZBTB21Q9ULJ3 1066 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 CORO1CQ9ULV4 474 aaPredicted RBP17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 ARL2BPQ9Y2Y0 163 aa17.76■□□□□ 0.43
PCDHA1-201ENST00000378133 MIF4GDA9UHW6 222 aaKnown RBP17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 MYBPC2Q14324 1141 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 C11orf63Q6NUN7 778 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 CCDC25Q86WR0 208 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 LDHDQ86WU2 507 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 CPNE8Q86YQ8 564 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 FITM2Q8N6M3 262 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 BTBD6Q96KE9 485 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 ADAM22Q9P0K1 906 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 HERC5Q9UII4 1024 aaKnown RBP17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 TRIM33Q9UPN9 1127 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 RBBP6Q7Z6E9 1792 aaKnown RBP17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 PYGMP11217 842 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 EPC2Q52LR7 807 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 MFSD5Q6N075 450 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 SPATA21Q7Z572 469 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 TMEM206Q9H813 350 aa17.75■□□□□ 0.43
PCDHA1-201ENST00000378133 TCRBV7S2A1N4TA0A589 114 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 TMEM120BA0PK00 339 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 PEX5P50542 639 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 LONRF1Q17RB8 773 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 CCDC137Q6PK04 289 aaKnown RBP17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 ARHGEF2Q92974 986 aaKnown RBP17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 ROPN1BQ9BZX4 212 aaPredicted RBP17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 TAOK3Q9H2K8 898 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 ROPN1Q9HAT0 212 aaPredicted RBP17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 RXFP1Q9HBX9 757 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 MLXIPLQ9NP71 852 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 KCNH7Q9NS40 1196 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 HSPBP1Q9NZL4 362 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 PCYOX1Q9UHG3 505 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 SYNPO2Q9UMS6 1093 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 ZHX2Q9Y6X8 837 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 GOLGA8IPA6NC78 632 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 GOLGA8JA6NMD2 632 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 HGSO14964 777 aaPredicted RBP17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 CHRNB2P17787 502 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 BLMHQ13867 455 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 LLGL1Q15334 1064 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 ASRGL1Q7L266 308 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 NOP9Q86U38 636 aaKnown RBP17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 XXYLT1Q8NBI6 393 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 RUNDC3BQ96NL0 473 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 ACCSQ96QU6 501 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 RIT2Q99578 217 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 MOV10L1Q9BXT6 1211 aaKnown RBP17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 KCNK9Q9NPC2 374 aa17.74■□□□□ 0.43
PCDHA1-201ENST00000378133 PFASO15067 1338 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 EME2A4GXA9 379 aaPredicted RBP17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 TMEM150BA6NC51 233 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 O00370 1275 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 CYP26A1O43174 497 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 GJB6O95452 261 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 CREB1P16220 341 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 CTNNA2P26232 953 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 SSR1P43307 286 aaKnown RBP17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 SLC47A2Q86VL8 602 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 PPM1KQ8N3J5 372 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 ANKRD42Q8N9B4 389 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 EPS8L1Q8TE68 723 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 FAM167BQ9BTA0 163 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 TMEM117Q9H0C3 514 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 PTPN22Q9Y2R2 807 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 ENO4A6NNW6 628 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 LIN7AO14910 233 aaPredicted RBP17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 P4HBP07237 508 aaKnown RBP17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 HSPA6P17066 643 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 KCNJ1P48048 391 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 SEL1L2Q5TEA6 688 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 AGBL1Q96MI9 1066 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 RPS6KC1Q96S38 1066 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 PCDHA3Q9Y5H8 950 aa17.73■□□□□ 0.43
PCDHA1-201ENST00000378133 LUC7L3O95232 432 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms