RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 RNF34Q969K3 372 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 RNF25Q96BH1 459 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 NEU2Q9Y3R4 380 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 ABCC6O95255 1503 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 PSTPIP1O43586 416 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 KRT3P12035 628 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 ECE1P42892 770 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 QARSP47897 775 aaKnown RBP9.29□□□□□ -0.92
PCDH9-202ENST00000377865 YARSP54577 528 aaKnown RBP9.29□□□□□ -0.92
PCDH9-202ENST00000377865 KPNB1Q14974 876 aaKnown RBP9.29□□□□□ -0.92
PCDH9-202ENST00000377865 KYNUQ16719 465 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 MIIPQ5JXC2 388 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 TEDDM1Q5T9Z0 273 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 SPICE1Q8N0Z3 855 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 TATDN2Q93075 761 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 NPHS2Q9NP85 383 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 GTF3C4Q9UKN8 822 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 NFAT5O94916 1531 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 WDR64B1ANS9 1081 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 SERPINB2P05120 415 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 STX1BP61266 288 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 ELF3P78545 371 aaPredicted RBP9.29□□□□□ -0.92
PCDH9-202ENST00000377865 ROR1Q01973 937 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 FRMD8P1Q9BZ68 369 aaPredicted RBP9.29□□□□□ -0.92
PCDH9-202ENST00000377865 TCP10L2B9ZVM9 353 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 SLC16A4O15374 487 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 KRT80Q6KB66 452 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 NUDCD3Q8IVD9 361 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 JDP2Q8WYK2 163 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 TRIM56Q9BRZ2 755 aaKnown RBP9.29□□□□□ -0.92
PCDH9-202ENST00000377865 THAP2Q9H0W7 228 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 CCDC68Q9H2F9 335 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 SEPT10Q9P0V9 454 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 TRAF3IP3Q9Y228 551 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 REXO2Q9Y3B8 237 aaKnown RBP9.29□□□□□ -0.92
PCDH9-202ENST00000377865 HSPA2P54652 639 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 IFRD2Q12894 506 aaPredicted RBP9.29□□□□□ -0.92
PCDH9-202ENST00000377865 MIGA2Q7L4E1 593 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 C18orf8Q96DM3 657 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 HSD3B7Q9H2F3 369 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 TSPYL2Q9H2G4 693 aaPredicted RBP9.29□□□□□ -0.92
PCDH9-202ENST00000377865 PHTF1Q9UMS5 762 aa9.29□□□□□ -0.92
PCDH9-202ENST00000377865 RIPK2O43353 540 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 HSPA4LO95757 839 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 TFRCP02786 760 aaKnown RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 CTCFP49711 727 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 SENP7Q9BQF6 1050 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 ADPGKQ9BRR6 497 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 OSBPL8Q9BZF1 889 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 JMJD4Q9H9V9 463 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 A1CFQ9NQ94 594 aaKnown RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 TTC7AQ9ULT0 858 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 LRRC37A3O60309 1634 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 KLRC4O43908 158 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 UBOX5O94941 541 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 MYBL2P10244 700 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 SNAP25P60880 206 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 RARS2Q5T160 578 aaKnown RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 ARL4AP40617 200 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 TMED1Q13445 227 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 MTMR1Q13613 665 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 TTLL12Q14166 644 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 RPS6KA2Q15349 733 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 TMEM270Q6UE05 265 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 TRIML2Q8N7C3 387 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 HSPH1Q92598 858 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 PURBQ96QR8 312 aaKnown RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 GOLPH3Q9H4A6 298 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 PFDN4Q9NQP4 134 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 ZNF277Q9NRM2 450 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 NYAP2Q9P242 653 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 LMO7Q8WWI1 1683 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 GPC4O75487 556 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 LCA5LO95447 670 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 CRKP46108 304 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 PSMC5P62195 406 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 ACAD11Q709F0 780 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 RAPH1Q70E73 1250 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 HAUS6Q7Z4H7 955 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 GLG1Q92896 1179 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 IPO11Q9UI26 975 aaKnown RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 TLK1Q9UKI8 766 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 DENND3A2RUS2 1198 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 GOLGA8MH3BSY2 632 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 MCF2P10911 925 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 GZMAP12544 262 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 GEMIN4P57678 1058 aaKnown RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 ZBTB17Q13105 803 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 MYBPC2Q14324 1141 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 PPP2R5DQ14738 602 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 EAPPQ56P03 285 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 CATSPER3Q86XQ3 398 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 CDKL3Q8IVW4 592 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 SDCCAG3Q96C92 435 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 NAF1Q96HR8 494 aaKnown RBP9.28□□□□□ -0.92
PCDH9-202ENST00000377865 PAGR1Q9BTK6 254 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 DCLRE1BQ9H816 532 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 TMEM8AQ9HCN3 771 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 LTN1O94822 1766 aa9.28□□□□□ -0.92
PCDH9-202ENST00000377865 ENO4A6NNW6 628 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms