RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 EFHC1Q5JVL4 640 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ILKAPQ9H0C8 392 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 HSD17B4P51659 736 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 UBE2TQ9NPD8 197 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SREBF1P36956 1147 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 GSCP56915 257 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 CCDC153Q494R4 210 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 CIAPIN1Q6FI81 312 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ACAD11Q709F0 780 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 NUDCD1Q96RS6 583 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 PRR23AA6NEV1 266 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ITPRIPL1Q6GPH6 555 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SNIP1Q8TAD8 396 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ZMAT2Q96NC0 199 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 GREM2Q9H772 168 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 NMRK1Q9NWW6 199 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 POLIQ9UNA4 740 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 GCKP35557 465 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 FOSBP53539 338 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 MIER3Q7Z3K6 550 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 KCTD6Q8NC69 237 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 OSBPL8Q9BZF1 889 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 PLS3P13797 630 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ACADVLP49748 655 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 VPS45Q9NRW7 570 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 PPP2R3BQ9Y5P8 575 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 KCNN1Q92952 543 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 OTUD4Q01804 1114 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SPATA21Q7Z572 469 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 KAT6BQ8WYB5 2073 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ADGRB3O60242 1522 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 POTEB3A0JP26 581 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 CDK8P49336 464 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 STXBP2Q15833 593 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 CRY1Q16526 586 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ABCB5Q2M3G0 1257 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 POTEBQ6S5H4 581 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 RIOK1Q9BRS2 568 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 C6orf203Q9P0P8 240 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 KRT72Q14CN4 511 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 PDK1Q15118 436 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 NDUFA5Q16718 116 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 PPIL6Q8IXY8 311 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 RBM15Q96T37 977 aaKnown RBP eCLIP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 IQCA1LA6NCM1 817 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 HNRNPH1P31943 449 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 VCPKMTQ9H867 229 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 FRMPD1Q5SYB0 1578 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 RRN3P2A6NIE6 340 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 MYL7Q01449 175 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ART3Q13508 389 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SCHIP1Q9P0W5 487 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 NEU2Q9Y3R4 380 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 PALMO75781 387 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SERPINB6P35237 376 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 PRR16Q569H4 304 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 PIGBQ92521 554 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ADAM22Q9P0K1 906 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 HNRNPDLO14979 420 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ITGAVP06756 1048 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ROR2Q01974 943 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 RNF169Q8NCN4 708 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 GPTP24298 496 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 ARID5AQ03989 594 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 SLC39A6Q13433 755 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 CDK5RAP1Q96SZ6 601 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 MRPL1Q9BYD6 325 aaKnown RBP5.22□□□□□ -1.57
PCDH9-201ENST00000377861 VWDEQ8N2E2 1590 aa5.22□□□□□ -1.57
PCDH9-201ENST00000377861 IL1R1P14778 569 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 CCDC137Q6PK04 289 aaKnown RBP5.21□□□□□ -1.57
PCDH9-201ENST00000377861 ZDHHC15Q96MV8 337 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 MAP3K4Q9Y6R4 1608 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 LRRC74AQ0VAA2 488 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 MEGF6O75095 1541 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 TIMM44O43615 452 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 EFHC2Q5JST6 749 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 SMCR8Q8TEV9 937 aaPredicted RBP5.21□□□□□ -1.57
PCDH9-201ENST00000377861 PLEKHA4Q9H4M7 779 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 SOX13Q9UN79 622 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 F5H6K3 240 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 ALOX15BO15296 676 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 TNNI1P19237 187 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 KLRC3Q07444 240 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 KCNJ14Q9UNX9 436 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 AAR2Q9Y312 384 aaKnown RBP5.21□□□□□ -1.57
PCDH9-201ENST00000377861 DAPK3O43293 454 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 TAF11Q15544 211 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 KRT24Q2M2I5 525 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 TPCN2Q8NHX9 752 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 HIC2Q96JB3 615 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 MTMR9Q96QG7 549 aa5.21□□□□□ -1.57
PCDH9-201ENST00000377861 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.21□□□□□ -1.57
PCDH9-201ENST00000377861 KDM5AP29375 1690 aaKnown RBP5.21□□□□□ -1.57
PCDH9-201ENST00000377861 HSPA1AP0DMV8 641 aaKnown RBP5.21□□□□□ -1.58
PCDH9-201ENST00000377861 HSPA1BP0DMV9 641 aaKnown RBP5.21□□□□□ -1.58
PCDH9-201ENST00000377861 MAGOHP61326 146 aaKnown RBP5.21□□□□□ -1.58
PCDH9-201ENST00000377861 GRIK2Q13002 908 aa5.21□□□□□ -1.58
PCDH9-201ENST00000377861 THOC5Q13769 683 aaKnown RBP5.21□□□□□ -1.58
PCDH9-201ENST00000377861 SEC23AQ15436 765 aa5.21□□□□□ -1.58
PCDH9-201ENST00000377861 RABL2AQ9UBK7 228 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms