RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 FAM81BQ96LP2 452 aa21.72■■□□□ 1.07
VSX1-202ENST00000376709 MSTO1Q9BUK6 570 aa21.72■■□□□ 1.07
VSX1-202ENST00000376709 OPA1O60313 960 aa21.72■■□□□ 1.07
VSX1-202ENST00000376709 PIK3CAP42336 1068 aa21.72■■□□□ 1.07
VSX1-202ENST00000376709 CLDN10P78369 228 aa21.72■■□□□ 1.07
VSX1-202ENST00000376709 ZNF211Q13398 564 aaPredicted RBP21.72■■□□□ 1.07
VSX1-202ENST00000376709 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.72■■□□□ 1.07
VSX1-202ENST00000376709 ALG3Q92685 438 aa21.72■■□□□ 1.07
VSX1-202ENST00000376709 ZBTB45Q96K62 511 aaPredicted RBP21.72■■□□□ 1.07
VSX1-202ENST00000376709 CEP89Q96ST8 783 aa21.72■■□□□ 1.07
VSX1-202ENST00000376709 MPHOSPH6Q99547 160 aaKnown RBP21.72■■□□□ 1.07
VSX1-202ENST00000376709 TARS2Q9BW92 718 aaKnown RBP21.72■■□□□ 1.07
VSX1-202ENST00000376709 RBAKQ9NYW8 714 aaPredicted RBP21.72■■□□□ 1.07
VSX1-202ENST00000376709 SIP14410 1827 aa21.72■■□□□ 1.07
VSX1-202ENST00000376709 GOLGA6L10A0A0M3HER8 536 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 PIGRP01833 764 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 CAPN2P17655 700 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 CLUL1Q15846 466 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 LY6KQ17RY6 165 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 METTL7BQ6UX53 244 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 ZNF564Q8TBZ8 553 aaPredicted RBP21.71■■□□□ 1.07
VSX1-202ENST00000376709 SEPT1Q8WYJ6 367 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 NUP85Q9BW27 656 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 AZI2Q9H6S1 392 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 GOLGA6CA6NDK9 693 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 LDHAP00338 332 aaKnown RBP21.71■■□□□ 1.07
VSX1-202ENST00000376709 PGK2P07205 417 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 GOLGA6DP0CG33 693 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 ZACNQ401N2 412 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 TDRD10Q5VZ19 366 aaKnown RBP21.71■■□□□ 1.07
VSX1-202ENST00000376709 ADAT2Q7Z6V5 191 aaKnown RBP21.71■■□□□ 1.07
VSX1-202ENST00000376709 EIF1ADQ8N9N8 165 aaKnown RBP21.71■■□□□ 1.07
VSX1-202ENST00000376709 DDX1Q92499 740 aaKnown RBP21.71■■□□□ 1.07
VSX1-202ENST00000376709 KCNN1Q92952 543 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 HAPLN2Q9GZV7 340 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 GOLGA6AQ9NYA3 693 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 RBPJLQ9UBG7 517 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 GTF3C4Q9UKN8 822 aa21.71■■□□□ 1.07
VSX1-202ENST00000376709 MTA2O94776 668 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 HLA-DRAP01903 254 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 COMTP21964 271 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 WNT7BP56706 349 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 TARBP2Q15633 366 aaKnown RBP21.7■■□□□ 1.06
VSX1-202ENST00000376709 Q3C1V9 767 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 CFAP58Q5T655 872 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 MREGQ8N565 214 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 RPS6KC1Q96S38 1066 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 GLTPD2A6NH11 291 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 GOLGA8KD6RF30 607 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 TTI1O43156 1089 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 CLSTN1O94985 981 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 CYP1A2P05177 515 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 GJA5P36382 358 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 PPFIA1Q13136 1202 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 CAPSQ13938 189 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 CRELD2Q6UXH1 353 aaPredicted RBP21.7■■□□□ 1.06
VSX1-202ENST00000376709 ARMC9Q7Z3E5 817 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 GLG1Q92896 1179 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 ZIM3Q96PE6 472 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 SH3GL2Q99962 352 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 ZSWIM1Q9BR11 485 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 TRPC6Q9Y210 931 aa21.7■■□□□ 1.06
VSX1-202ENST00000376709 LRRC37A2A6NM11 1700 aa21.69■■□□□ 1.06
VSX1-202ENST00000376709 SLC25A27O95847 323 aa21.69■■□□□ 1.06
VSX1-202ENST00000376709 C4BPAP04003 597 aaKnown RBP21.69■■□□□ 1.06
VSX1-202ENST00000376709 HNRNPH2P55795 449 aaKnown RBP21.69■■□□□ 1.06
VSX1-202ENST00000376709 ACAD10Q6JQN1 1059 aa21.69■■□□□ 1.06
VSX1-202ENST00000376709 GPAT2Q6NUI2 795 aa21.69■■□□□ 1.06
VSX1-202ENST00000376709 DDX42Q86XP3 938 aaKnown RBP eCLIP21.69■■□□□ 1.06
VSX1-202ENST00000376709 FAM76AQ8TAV0 307 aa21.69■■□□□ 1.06
VSX1-202ENST00000376709 MORC4Q8TE76 937 aa21.69■■□□□ 1.06
VSX1-202ENST00000376709 KRT35Q92764 455 aa21.69■■□□□ 1.06
VSX1-202ENST00000376709 UVRAGQ9P2Y5 699 aa21.69■■□□□ 1.06
VSX1-202ENST00000376709 UTP11Q9Y3A2 253 aaKnown RBP21.69■■□□□ 1.06
VSX1-202ENST00000376709 NR2E1Q9Y466 385 aa21.69■■□□□ 1.06
VSX1-202ENST00000376709 A0A0B4J269 797 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 NOP56O00567 594 aaKnown RBP21.68■■□□□ 1.06
VSX1-202ENST00000376709 SPOPO43791 374 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 MAFO75444 373 aaPredicted RBP21.68■■□□□ 1.06
VSX1-202ENST00000376709 HARSP12081 509 aaKnown RBP21.68■■□□□ 1.06
VSX1-202ENST00000376709 MARK3P27448 753 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 PTENP60484 403 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 PPP2R5EQ16537 467 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 ZBTB41Q5SVQ8 909 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 FAM167AQ96KS9 214 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 CELF4Q9BZC1 486 aaKnown RBP21.68■■□□□ 1.06
VSX1-202ENST00000376709 TMEM134Q9H6X4 195 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 PTPRJQ12913 1337 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 ADCY3O60266 1144 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 MARCKSL1P49006 195 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 DRP2Q13474 957 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 CLEC16AQ2KHT3 1053 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 FASTKD5Q7L8L6 764 aaKnown RBP21.68■■□□□ 1.06
VSX1-202ENST00000376709 PRPF31Q8WWY3 499 aaKnown RBP21.68■■□□□ 1.06
VSX1-202ENST00000376709 WNT8AQ9H1J5 351 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 PCDHB2Q9Y5E7 798 aa21.68■■□□□ 1.06
VSX1-202ENST00000376709 GRIN3BO60391 1043 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 CALCAP01258 141 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 EDN1P05305 212 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 OSBPP22059 807 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms