RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 HS1BP3Q53T59 392 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 FBXO47Q5MNV8 452 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 ZNF618Q5T7W0 954 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 DPY19L2P1Q6NXN4 242 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 SLC27A1Q6PCB7 646 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 TRAF7Q6Q0C0 670 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 GBP6Q6ZN66 633 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 APBB1IPQ7Z5R6 666 aaPredicted RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 TC2NQ8N9U0 490 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 DIS3LQ8TF46 1054 aaKnown RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 CACTINQ8WUQ7 758 aaKnown RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 TRIM44Q96DX7 344 aaPredicted RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 CCDC51Q96ER9 411 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 NUP58Q9BVL2 599 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 EIF2AQ9BY44 585 aaKnown RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 OSBPL7Q9BZF2 842 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 TMEM117Q9H0C3 514 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 INTS2Q9H0H0 1204 aaKnown RBP11.34□□□□□ -0.59
PDPN-203ENST00000376061 GANQ9H2C0 597 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 TMEM8AQ9HCN3 771 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 SIX2Q9NPC8 291 aa11.34□□□□□ -0.59
PDPN-203ENST00000376061 A0A1W2PQJ5 194 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 AKR1B15C9JRZ8 316 aaPredicted RBP11.33□□□□□ -0.6
PDPN-203ENST00000376061 PMM2O15305 246 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 P4HA2O15460 535 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 RPS6KA5O75582 802 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 NOL4O94818 638 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 CD4P01730 458 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 TPM1P09493 284 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 CLTAP09496 248 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 STAG3L1P0CL83 205 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 GHRP10912 638 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 COL6A1P12109 1028 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 CKBP12277 381 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 ACTN1P12814 892 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 SLC9A1P19634 815 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 PON1P27169 355 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 GRM5P41594 1212 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 ADKP55263 362 aaKnown RBP11.33□□□□□ -0.6
PDPN-203ENST00000376061 LRMPQ12912 555 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 LPIN1Q14693 890 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 KYAT1Q16773 422 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 EPC2Q52LR7 807 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 UBXN11Q5T124 520 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 LMBRD2Q68DH5 695 aaPredicted RBP11.33□□□□□ -0.6
PDPN-203ENST00000376061 TRIM65Q6PJ69 517 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 C15orf39Q6ZRI6 1047 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 CNGA4Q8IV77 575 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 LRRC8AQ8IWT6 810 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 NEK11Q8NG66 645 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 CPLX3Q8WVH0 158 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 IQCDQ96DY2 449 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 FNBP1Q96RU3 617 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 AGO3Q9H9G7 860 aaKnown RBP11.33□□□□□ -0.6
PDPN-203ENST00000376061 ERVK-5Q9HDB9 667 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 PLCB1Q9NQ66 1216 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 CAPN11Q9UMQ6 739 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 ST3GAL5Q9UNP4 418 aa11.33□□□□□ -0.6
PDPN-203ENST00000376061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.33□□□□□ -0.6
PDPN-203ENST00000376061 KIAA0100Q14667 2235 aaKnown RBP11.33□□□□□ -0.6
PDPN-203ENST00000376061 MROH7Q68CQ1 1323 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 PQBP1O60828 265 aaKnown RBP11.32□□□□□ -0.6
PDPN-203ENST00000376061 IL18RAPO95256 599 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 CCZ1BP86790 482 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 CCZ1P86791 482 aaPredicted RBP11.32□□□□□ -0.6
PDPN-203ENST00000376061 POU5F1Q01860 360 aaKnown RBP11.32□□□□□ -0.6
PDPN-203ENST00000376061 PAK2Q13177 524 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 MBTPS1Q14703 1052 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 ZACNQ401N2 412 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 KRT39Q6A163 491 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 SV2AQ7L0J3 742 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 WDR49Q8IV35 697 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 EFCAB13Q8IY85 973 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 ANKLE1Q8NAG6 615 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 OR5B17Q8NGF7 314 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 LMO3Q8TAP4 145 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 CAGE1Q8TC20 777 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 ZNF516Q92618 1163 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 ZNF830Q96NB3 372 aaPredicted RBP11.32□□□□□ -0.6
PDPN-203ENST00000376061 PANX2Q96RD6 677 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 CCDC94Q9BW85 323 aaPredicted RBP11.32□□□□□ -0.6
PDPN-203ENST00000376061 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
PDPN-203ENST00000376061 NXF3Q9H4D5 531 aaKnown RBP11.32□□□□□ -0.6
PDPN-203ENST00000376061 RPF1Q9H9Y2 349 aaKnown RBP11.32□□□□□ -0.6
PDPN-203ENST00000376061 CEP72Q9P209 647 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 AJAP1Q9UKB5 411 aaPredicted RBP11.32□□□□□ -0.6
PDPN-203ENST00000376061 COQ4Q9Y3A0 265 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 SCN5AQ14524 2016 aa11.32□□□□□ -0.6
PDPN-203ENST00000376061 GPR182O15218 404 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 C4BPAP04003 597 aaKnown RBP11.31□□□□□ -0.6
PDPN-203ENST00000376061 TNNI1P19237 187 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 CD52P31358 61 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 KRT9P35527 623 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 POLR2FP61218 127 aaKnown RBP11.31□□□□□ -0.6
PDPN-203ENST00000376061 ZBED6P86452 979 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 CETN1Q12798 172 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
PDPN-203ENST00000376061 SURF1Q15526 300 aa11.31□□□□□ -0.6
PDPN-203ENST00000376061 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms