RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 INTUQ9ULD6 942 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 RIPK3Q9Y572 518 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 DDNO94850 711 aaPredicted RBP13.82□□□□□ -0.2
MSH5-204ENST00000375755 CYP3A4P08684 503 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 MXRA7P84157 204 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 PPATQ06203 517 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 TRAF1Q13077 416 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 PPP2R5EQ16537 467 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 MFSD5Q6N075 450 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 FAM160B2Q86V87 743 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 MFN1Q8IWA4 741 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 SYT15Q9BQS2 421 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 CARD9Q9H257 536 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 RNPEPL1Q9HAU8 725 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 SPON1Q9HCB6 807 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 SIX2Q9NPC8 291 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 TMOD4Q9NZQ9 345 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 MRPL11Q9Y3B7 192 aaKnown RBP13.82□□□□□ -0.2
MSH5-204ENST00000375755 ATP8B3O60423 1300 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 RBBP6Q7Z6E9 1792 aaKnown RBP13.82□□□□□ -0.2
MSH5-204ENST00000375755 CETN3O15182 167 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 PEX11AO75192 247 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 UNC5CO95185 931 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 GH1P01241 217 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 ICAM1P05362 532 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 RAD23BP54727 409 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 MPP2Q14168 576 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 OTOP1Q7RTM1 612 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 TRMT1LQ7Z2T5 733 aaKnown RBP13.82□□□□□ -0.2
MSH5-204ENST00000375755 VPS36Q86VN1 386 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 ARHGEF2Q92974 986 aaKnown RBP13.82□□□□□ -0.2
MSH5-204ENST00000375755 RUSC1Q9BVN2 902 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 WDR11Q9BZH6 1224 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 RASAL2Q9UJF2 1139 aa13.82□□□□□ -0.2
MSH5-204ENST00000375755 COL11A1P12107 1806 aaPredicted RBP13.81□□□□□ -0.2
MSH5-204ENST00000375755 LTBP3Q9NS15 1303 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 LRRD1A4D1F6 860 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 ANKRD63C9JTQ0 380 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 AFPP02771 609 aaKnown RBP13.81□□□□□ -0.2
MSH5-204ENST00000375755 GM2AP17900 193 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 ITGB5P18084 799 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 CALB2P22676 271 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 NR2F2P24468 414 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 PCK1P35558 622 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 HMGCS2P54868 508 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 JAM2P57087 298 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 HERC4Q5GLZ8 1057 aaPredicted RBP13.81□□□□□ -0.2
MSH5-204ENST00000375755 TTC27Q6P3X3 843 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 ECHDC2Q86YB7 292 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 TPH2Q8IWU9 490 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 TEKT4Q8WW24 435 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 CKAP2Q8WWK9 683 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 ATG4CQ96DT6 458 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 DYDC2Q96IM9 177 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 NAP1L4Q99733 375 aaKnown RBP13.81□□□□□ -0.2
MSH5-204ENST00000375755 TRIM7Q9C029 511 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 KIAA1683Q9H0B3 1180 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 NT5C3AQ9H0P0 336 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 BHMT2Q9H2M3 363 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 GPRC5DQ9NZD1 345 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 MTRF1LQ9UGC7 380 aaKnown RBP13.81□□□□□ -0.2
MSH5-204ENST00000375755 PCDHA3Q9Y5H8 950 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 ZHX2Q9Y6X8 837 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 PFASO15067 1338 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 GFPT2O94808 682 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 ABCB4P21439 1286 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 GBP1P32455 592 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 ROR2Q01974 943 aaKnown RBP13.81□□□□□ -0.2
MSH5-204ENST00000375755 NAP1L3Q99457 506 aaPredicted RBP13.81□□□□□ -0.2
MSH5-204ENST00000375755 DIS3Q9Y2L1 958 aaKnown RBP13.81□□□□□ -0.2
MSH5-204ENST00000375755 NCANO14594 1321 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 KDM3AQ9Y4C1 1321 aa13.81□□□□□ -0.2
MSH5-204ENST00000375755 WDR46O15213 610 aaKnown RBP13.8□□□□□ -0.2
MSH5-204ENST00000375755 PSMD10O75832 226 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 SLITRK3O94933 977 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 KRT18P05783 430 aaKnown RBP13.8□□□□□ -0.2
MSH5-204ENST00000375755 ANXA13P27216 316 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 RPA1P27694 616 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 SKIV2L2P42285 1042 aaKnown RBP13.8□□□□□ -0.2
MSH5-204ENST00000375755 EPHA7Q15375 998 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 CCDC25Q86WR0 208 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 GLYCTKQ8IVS8 523 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 ZDHHC14Q8IZN3 488 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 PRELID2Q8N945 189 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 FBF1Q8TES7 1133 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 RFFLQ8WZ73 363 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 ARHGEF26Q96DR7 871 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 PLCD4Q9BRC7 762 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 SH2D3AQ9BRG2 576 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 REEP2Q9BRK0 252 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 DDX23Q9BUQ8 820 aaKnown RBP13.8□□□□□ -0.2
MSH5-204ENST00000375755 FHDC1Q9C0D6 1143 aaPredicted RBP13.8□□□□□ -0.2
MSH5-204ENST00000375755 UNC45AQ9H3U1 944 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 KCNK9Q9NPC2 374 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 ARMCX3Q9UH62 379 aaPredicted RBP13.8□□□□□ -0.2
MSH5-204ENST00000375755 SSC5DA1L4H1 1573 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 PLA2G6O60733 806 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 PHF2O75151 1096 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 RTN3O95197 1032 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms