RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 A0A1W2PQC6 194 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 FAM205CA6NFA0 338 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 F8W8V4 182 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 GGPS1O95749 300 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 SRGAP2CP0DJJ0 459 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 KCNA4P22459 653 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 MARK3P27448 753 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 HSPA9P38646 679 aaKnown RBP13□□□□□ -0.33
NPLOC4-202ENST00000374747 KNOP1Q1ED39 458 aaKnown RBP13□□□□□ -0.33
NPLOC4-202ENST00000374747 ANGPTL8Q6UXH0 198 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 SPATA4Q8NEY3 305 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 ENGASEQ8NFI3 743 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 ADA2Q9NZK5 511 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 STRIP2Q9ULQ0 834 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 TEX33O43247 280 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 CYP2C19P33261 490 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 EFTUD2Q15029 972 aaKnown RBP eCLIP12.99□□□□□ -0.334e-9■■■■■ 27.7
NPLOC4-202ENST00000374747 KCNV1Q6PIU1 500 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 ATP11CQ8NB49 1132 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 XXYLT1Q8NBI6 393 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 GFM2Q969S9 779 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 DACH2Q96NX9 599 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 NUP85Q9BW27 656 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 CCDC90BQ9GZT6 254 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 EPN3Q9H201 632 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 GABBR1Q9UBS5 961 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 MAD2L2Q9UI95 211 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 EYA4O95677 639 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 KRT4P19013 534 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 ZNF667Q5HYK9 610 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 HABP4Q5JVS0 413 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 CCDC137Q6PK04 289 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 RNF139Q8WU17 664 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 WNT8AQ9H1J5 351 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 PCDHA10Q9Y5I2 948 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 EIF4E1BA6NMX2 242 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 ZFXP17010 805 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 IFNA8P32881 189 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 SPATA21Q7Z572 469 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 BATF3Q9NR55 127 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 TRAF3IP3Q9Y228 551 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 TMEM247A6NEH6 219 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 ASB14A6NK59 587 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 HNRNPCP07910 306 aaKnown RBP eCLIP12.99□□□□□ -0.333e-6■■■□□ 18.5
NPLOC4-202ENST00000374747 MDH1P40925 334 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 VGLL2Q8N8G2 317 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 DAGLBQ8NCG7 672 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 CATSPER1Q8NEC5 780 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 RNF217Q8TC41 542 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.99□□□□□ -0.337e-8■■■■■ 102.7
NPLOC4-202ENST00000374747 NLRP4Q96MN2 994 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 WDR24Q96S15 920 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 PPP1R12AO14974 1030 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 PDIA2Q13087 525 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 METTL16Q86W50 562 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 ZBED8Q8IZ13 594 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 ABI1Q8IZP0 508 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 GCOM2Q9BZD3 368 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 ELP3Q9H9T3 547 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 KIF9Q9HAQ2 790 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 CYP4F11Q9HBI6 524 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 CRYBG1Q9Y4K1 1723 aa12.99□□□□□ -0.33
NPLOC4-202ENST00000374747 KCNJ6P48051 423 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 SWSAP1Q6NVH7 229 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 PRMT6Q96LA8 375 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 WWP1Q9H0M0 922 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 SENP1Q9P0U3 644 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 ARL2BPQ9Y2Y0 163 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 AARSP49588 968 aaKnown RBP eCLIP12.98□□□□□ -0.337e-9■■■■■ 34.3
NPLOC4-202ENST00000374747 GPS1Q13098 491 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 SEPT8Q92599 483 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 RNF25Q96BH1 459 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 PFASO15067 1338 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 KRT14P02533 472 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 GCLMP48507 274 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 CAPRIN1Q14444 709 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 FRA10AC1Q70Z53 315 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 NOP9Q86U38 636 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 CCNYL1Q8N7R7 359 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 DTNBP1Q96EV8 351 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 MTRQ99707 1265 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 C11orf70Q9BRQ4 267 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 HEY1Q9Y5J3 304 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 SNX2O60749 519 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 ZSCAN20P17040 1043 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 SERPINB4P48594 390 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 BYSLQ13895 437 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 MAPK6Q16659 721 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 ADGRA1Q86SQ6 560 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 ARHGAP26Q9UNA1 814 aa12.98□□□□□ -0.33
NPLOC4-202ENST00000374747 DAB2P98082 770 aa12.97□□□□□ -0.33
NPLOC4-202ENST00000374747 OR9Q1Q8NGQ5 310 aa12.97□□□□□ -0.33
NPLOC4-202ENST00000374747 ZNF473Q8WTR7 871 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-202ENST00000374747 RFFLQ8WZ73 363 aa12.97□□□□□ -0.33
NPLOC4-202ENST00000374747 TRIM9Q9C026 710 aa12.97□□□□□ -0.33
NPLOC4-202ENST00000374747 DONSONQ9NYP3 566 aa12.97□□□□□ -0.33
NPLOC4-202ENST00000374747 hCG_2014768A0A024R1R8 64 aa12.97□□□□□ -0.33
NPLOC4-202ENST00000374747 AGTP01019 485 aa12.97□□□□□ -0.33
NPLOC4-202ENST00000374747 GNAT1P11488 350 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms