RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NLRP12P59046 1061 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 ERVK-21P61565 698 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 TAP1Q03518 808 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 GRIK3Q13003 919 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 ENOX2Q16206 610 aaKnown RBP12.37□□□□□ -0.43
HSPG2-202ENST00000374676 EDRF1Q3B7T1 1238 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 PAN2Q504Q3 1202 aaKnown RBP12.37□□□□□ -0.43
HSPG2-202ENST00000374676 ZCWPW2Q504Y3 356 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 SEZ6Q53EL9 994 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 ZBTB41Q5SVQ8 909 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 MLKLQ8NB16 471 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 SNX27Q96L92 541 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 ZFP42Q96MM3 310 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 SAMD11Q96NU1 681 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 RPS6KC1Q96S38 1066 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 ASB7Q9H672 318 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 CNTN3Q9P232 1028 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 INPP5FQ9Y2H2 1132 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 RWDD3Q9Y3V2 267 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 MRPL42Q9Y6G3 142 aaKnown RBP12.37□□□□□ -0.43
HSPG2-202ENST00000374676 SMIM28A0A1B0GU29 152 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 ZNF233A6NK53 670 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 LACTBL1A8MY62 500 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 IL18RAPO95256 599 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 POMCP01189 267 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 NR3C1P04150 777 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 RB1P06400 928 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 CXCL8P10145 99 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 RPL13P26373 211 aaKnown RBP12.36□□□□□ -0.43
HSPG2-202ENST00000374676 BMPR1AP36894 532 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 RNASELQ05823 741 aaKnown RBP12.36□□□□□ -0.43
HSPG2-202ENST00000374676 LRRC63Q05C16 580 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 DSC1Q08554 894 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 NFKBIBQ15653 356 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 CT47A1Q5JQC4 288 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-202ENST00000374676 BRSK2Q8IWQ3 736 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 ZSWIM2Q8NEG5 633 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 P2RX5Q93086 422 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 SAAL1Q96ER3 474 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 FAM193BQ96PV7 902 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-202ENST00000374676 PPP1R10Q96QC0 940 aaKnown RBP12.36□□□□□ -0.43
HSPG2-202ENST00000374676 TGS1Q96RS0 853 aaKnown RBP12.36□□□□□ -0.43
HSPG2-202ENST00000374676 TSG101Q99816 390 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 FAM213AQ9BRX8 229 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 TMEM175Q9BSA9 504 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 CXCL16Q9H2A7 254 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 NRDE2Q9H7Z3 1164 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 AAASQ9NRG9 546 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-202ENST00000374676 CHD7Q9P2D1 2997 aa12.36□□□□□ -0.43
HSPG2-202ENST00000374676 MYO7AQ13402 2215 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 GOLGA8IPA6NC78 632 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 GOLGA8JA6NMD2 632 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 MAPK13O15264 365 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 EXOC3O60645 756 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 DDHD2O94830 711 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 ARHGEF15O94989 841 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 LETM1O95202 739 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-202ENST00000374676 LAG3P18627 525 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 CYP2J2P51589 502 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 PPP2R3AQ06190 1150 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 ADAM9Q13443 819 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 TUSC3Q13454 348 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 SURF1Q15526 300 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 NAB2Q15742 525 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 ZBTB6Q15916 424 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 PPP2R2DQ66LE6 453 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 ANKRD40Q6AI12 368 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 CAVIN1Q6NZI2 390 aaKnown RBP12.35□□□□□ -0.43
HSPG2-202ENST00000374676 NT5DC4Q86YG4 428 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 ZNF280BQ86YH2 543 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 CBWD2Q8IUF1 395 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 ZC3H3Q8IXZ2 948 aaKnown RBP12.35□□□□□ -0.43
HSPG2-202ENST00000374676 COLGALT2Q8IYK4 626 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 LRCH3Q96II8 777 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 MFSD14AQ96MC6 490 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 ZMAT2Q96NC0 199 aaKnown RBP12.35□□□□□ -0.43
HSPG2-202ENST00000374676 PLVAPQ9BX97 442 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 SLC38A7Q9NVC3 462 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 PLAGL2Q9UPG8 496 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 DERAQ9Y315 318 aa12.35□□□□□ -0.43
HSPG2-202ENST00000374676 BICDL2A1A5D9 508 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 C5orf67F2Z3F1 127 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 CETN3O15182 167 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 ALDH2P05091 517 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 GALTP07902 379 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 CYP3A5P20815 502 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 NR2F2P24468 414 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 BCAR1P56945 870 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 MCCD1P59942 119 aaPredicted RBP12.34□□□□□ -0.43
HSPG2-202ENST00000374676 FKBP3Q00688 224 aaKnown RBP12.34□□□□□ -0.43
HSPG2-202ENST00000374676 PAK1Q13153 545 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 SNRNP35Q16560 246 aaKnown RBP12.34□□□□□ -0.43
HSPG2-202ENST00000374676 EPC2Q52LR7 807 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 SPOUT1Q5T280 376 aaKnown RBP12.34□□□□□ -0.43
HSPG2-202ENST00000374676 SASS6Q6UVJ0 657 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 KCNT2Q6UVM3 1135 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 COLGALT1Q8NBJ5 622 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms