RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 SYN2Q92777 582 aaPredicted RBP12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 RHOBTB2Q9BYZ6 727 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 XPOTO43592 962 aaKnown RBP12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SRGAP2CP0DJJ0 459 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 NR2F2P24468 414 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 AGMOQ6ZNB7 445 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ENOSF1Q7L5Y1 443 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 DPH6Q7L8W6 267 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CBWD1Q9BRT8 395 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CCDC94Q9BW85 323 aaPredicted RBP12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PLVAPQ9BX97 442 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TTYH3Q9C0H2 523 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 HSFX1Q9UBD0 423 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 FRMD4BQ9Y2L6 1034 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PLXNA3P51805 1871 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 UMODL1Q5DID0 1318 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 A0A087WWV3 80 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 HNRNPDLO14979 420 aaKnown RBP12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 B4GALT5O43286 388 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 HNRNPH3P31942 346 aaKnown RBP12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PNPLA4P41247 253 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CACNB1Q02641 598 aaPredicted RBP12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 IKBKEQ14164 716 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CSGALNACT2Q8N6G5 542 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PLEKHO2Q8TD55 490 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 HPS3Q969F9 1004 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 MSTO1Q9BUK6 570 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 INTS13Q9NVM9 706 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CD52P31358 61 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TBX2Q13207 712 aaPredicted RBP12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ACAP3Q96P50 834 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 KIFC3Q9BVG8 833 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SIK3Q9Y2K2 1263 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 WDR5P61964 334 aaKnown RBP12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TPM4P67936 248 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 VWA3BQ502W6 1294 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 FAM186BQ8IYM0 893 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 BCO2Q9BYV7 579 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 DNAJC25Q9H1X3 360 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 UBQLN1Q9UMX0 589 aaKnown RBP12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 NOD1Q9Y239 953 aa12.12□□□□□ -0.47
CSGALNACT2-201ENST00000374466 M0QZQ0 153 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 AMHP03971 560 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 POU3F3P20264 500 aaPredicted RBP12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 VAMP7P51809 220 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TRIM14Q14142 442 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ZNF568Q3ZCX4 644 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CD300LGQ6UXG3 332 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CACTINQ8WUQ7 758 aaKnown RBP12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ZBTB10Q96DT7 871 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 NFE2L3Q9Y4A8 694 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 NR2E3Q9Y5X4 410 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 LRRIQ3A6PVS8 624 aaPredicted RBP12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 KCNJ18B7U540 433 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PTGESO14684 152 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PQBP1O60828 265 aaKnown RBP12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CDK17Q00537 523 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 KCNJ12Q14500 433 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 FAM47CQ5HY64 1035 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 FAM49AQ9H0Q0 323 aaPredicted RBP12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 INO80B-WBP1J3KQ70 363 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CBFA2T2O43439 604 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TACC1O75410 805 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TNS4Q8IZW8 715 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CNOT6LQ96LI5 555 aaKnown RBP12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 OSBPL7Q9BZF2 842 aa12.11□□□□□ -0.47
CSGALNACT2-201ENST00000374466 NPTXRO95502 500 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 GCNT1Q02742 428 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 UBE3AQ05086 875 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ZRSR1Q15695 479 aaKnown RBP12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 GAS2L3Q86XJ1 694 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PDLIM2Q96JY6 352 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SH2D3AQ9BRG2 576 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 EIF2AQ9BY44 585 aaKnown RBP12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 RPF1Q9H9Y2 349 aaKnown RBP12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CYP3A43Q9HB55 503 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ARMCX3Q9UH62 379 aaPredicted RBP12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TYMPP19971 482 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 INCA1Q0VD86 236 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 COLGALT2Q8IYK4 626 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 POMGNT1Q8WZA1 660 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 NUP58Q9BVL2 599 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CWH43Q9H720 699 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ATP11BQ9Y2G3 1177 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 AFPP02771 609 aaKnown RBP12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SMAD3P84022 425 aaKnown RBP12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PLCB3Q01970 1234 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 MRPL58Q14197 206 aaKnown RBP12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 KRT31Q15323 416 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CLLU1OSQ5K130 101 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 FAM109BQ6ICB4 259 aaPredicted RBP12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SYCP3Q8IZU3 236 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ZNF516Q92618 1163 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SRRTQ9BXP5 876 aaKnown RBP12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 XYLT2Q9H1B5 865 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 RBSNQ9H1K0 784 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SIX2Q9NPC8 291 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PCDHA11Q9Y5I1 949 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms