RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ZBTB45Q96K62 511 aaPredicted RBP13.55□□□□□ -0.24
PRPF4-202ENST00000374199 NT5C1BQ96P26 610 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.55□□□□□ -0.24
PRPF4-202ENST00000374199 TARS2Q9BW92 718 aaKnown RBP13.55□□□□□ -0.24
PRPF4-202ENST00000374199 APOBEC3GQ9HC16 384 aaKnown RBP13.55□□□□□ -0.24
PRPF4-202ENST00000374199 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 GNEQ9Y223 722 aaKnown RBP13.55□□□□□ -0.24
PRPF4-202ENST00000374199 PASKQ96RG2 1323 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 NCK2O43639 380 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 B4GALT4O60513 344 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 PPFIA4O75335 1185 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 SASH3O75995 380 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 SGPL1O95470 568 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 RHOT2Q8IXI1 618 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 SYCE1Q8N0S2 351 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 PBKQ96KB5 322 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 ARGLU1Q9NWB6 273 aaPredicted RBP13.55□□□□□ -0.24
PRPF4-202ENST00000374199 ADCY6O43306 1168 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 IQCF3P0C7M6 154 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 NKX3-2P78367 333 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 EIF1ADQ8N9N8 165 aaKnown RBP13.54□□□□□ -0.24
PRPF4-202ENST00000374199 ARHGEF26Q96DR7 871 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 RBAKQ9NYW8 714 aaPredicted RBP13.54□□□□□ -0.24
PRPF4-202ENST00000374199 OGTO15294 1046 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 MAGEB2O15479 319 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 VSNL1P62760 191 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 ADAM17P78536 824 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 IQSEC1Q6DN90 963 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 SLC47A2Q86VL8 602 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 SLC35G2Q8TBE7 412 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 TATDN2Q93075 761 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 LRRIQ4A6NIV6 560 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 SMPD1P17405 629 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 OLFML2BQ68BL8 750 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 MPZL3Q6UWV2 235 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 EEPD1Q7L9B9 569 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 PLEKHH3Q7Z736 793 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 GPIHBP1Q8IV16 184 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 C2orf69Q8N8R5 385 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 U2AF1L4Q8WU68 220 aaKnown RBP13.54□□□□□ -0.24
PRPF4-202ENST00000374199 LMBR1Q8WVP7 490 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 MSTO1Q9BUK6 570 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 THAP2Q9H0W7 228 aa13.54□□□□□ -0.24
PRPF4-202ENST00000374199 FAM124BQ9H5Z6 455 aaPredicted RBP13.54□□□□□ -0.24
PRPF4-202ENST00000374199 NOP56O00567 594 aaKnown RBP13.53□□□□□ -0.24
PRPF4-202ENST00000374199 ASS1P00966 412 aaKnown RBP13.53□□□□□ -0.24
PRPF4-202ENST00000374199 HLA-DRAP01903 254 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 MMP3P08254 477 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 NPLOC4Q8TAT6 608 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 TINF2Q9BSI4 451 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 ABHD16BQ9H3Z7 469 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 VRTNQ9H8Y1 702 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.53□□□□□ -0.24
PRPF4-202ENST00000374199 A6NJR5 290 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 PRKCBP05771 671 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 TFDP1Q14186 410 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 SURF1Q15526 300 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 CLEC16AQ2KHT3 1053 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 RPUSD2Q8IZ73 545 aaKnown RBP13.53□□□□□ -0.24
PRPF4-202ENST00000374199 USP38Q8NB14 1042 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 SEC14L1Q92503 715 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 RPS6KC1Q96S38 1066 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 PDE11AQ9HCR9 933 aa13.53□□□□□ -0.24
PRPF4-202ENST00000374199 AVENQ9NQS1 362 aaPredicted RBP13.53□□□□□ -0.24
PRPF4-202ENST00000374199 MBLAC1A4D2B0 266 aaPredicted RBP13.52□□□□□ -0.24
PRPF4-202ENST00000374199 CENPCQ03188 943 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 DCAF12L1Q5VU92 463 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 C17orf99Q6UX52 265 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 ILDR2Q71H61 639 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 CCDC127Q96BQ5 260 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 XYLT2Q9H1B5 865 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 MINDY3Q9H8M7 445 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 Q9Y3F1 56 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 HAS3O00219 553 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 CLTAP09496 248 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 MCM3P25205 808 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 PLA2G4AP47712 749 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 ARHGAP44Q17R89 818 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 CFAP221Q4G0U5 840 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 MTHFD1LQ6UB35 978 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 OR5B17Q8NGF7 314 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 AENQ8WTP8 325 aaKnown RBP13.52□□□□□ -0.24
PRPF4-202ENST00000374199 GLG1Q92896 1179 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 GDF3Q9NR23 364 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 GTF3C4Q9UKN8 822 aa13.52□□□□□ -0.24
PRPF4-202ENST00000374199 FAM155AB1AL88 458 aaPredicted RBP13.52□□□□□ -0.25
PRPF4-202ENST00000374199 CYP26A1O43174 497 aa13.52□□□□□ -0.25
PRPF4-202ENST00000374199 BUB1BO60566 1050 aaPredicted RBP13.52□□□□□ -0.25
PRPF4-202ENST00000374199 CELF2O95319 508 aaKnown RBP13.52□□□□□ -0.25
PRPF4-202ENST00000374199 STAU1O95793 577 aaKnown RBP13.52□□□□□ -0.25
PRPF4-202ENST00000374199 ZNF865P0CJ78 1059 aaPredicted RBP13.52□□□□□ -0.25
PRPF4-202ENST00000374199 TNFAIP3P21580 790 aa13.52□□□□□ -0.25
PRPF4-202ENST00000374199 TBXAS1P24557 533 aaPredicted RBP13.52□□□□□ -0.25
PRPF4-202ENST00000374199 ACOT2P49753 483 aa13.52□□□□□ -0.25
PRPF4-202ENST00000374199 CUL2Q13617 745 aa13.52□□□□□ -0.25
PRPF4-202ENST00000374199 MAPK6Q16659 721 aa13.52□□□□□ -0.25
PRPF4-202ENST00000374199 ZBTB8OSQ8IWT0 167 aa13.52□□□□□ -0.25
PRPF4-202ENST00000374199 BICD1Q96G01 975 aa13.52□□□□□ -0.25
PRPF4-202ENST00000374199 VIPAS39Q9H9C1 493 aa13.52□□□□□ -0.25
PRPF4-202ENST00000374199 OSGEPQ9NPF4 335 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms