RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 PJA2O43164 708 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 CASP1P29466 404 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 DMC1Q14565 340 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
VCL-202ENST00000372755 UGP2Q16851 508 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 TJAP1Q5JTD0 557 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 ZNF467Q7Z7K2 595 aaPredicted RBP12.16□□□□□ -0.46
VCL-202ENST00000372755 MB21D2Q8IYB1 491 aaPredicted RBP12.16□□□□□ -0.46
VCL-202ENST00000372755 GFM2Q969S9 779 aaKnown RBP12.16□□□□□ -0.46
VCL-202ENST00000372755 PGBD4Q96DM1 585 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 WDR35Q9P2L0 1181 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 LSM7Q9UK45 103 aaKnown RBP12.16□□□□□ -0.46
VCL-202ENST00000372755 ADGRG1Q9Y653 693 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 HAUS6Q7Z4H7 955 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 GLYCTKQ8IVS8 523 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 UNC45AQ9H3U1 944 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 FBXL5Q9UKA1 691 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 CLCA2Q9UQC9 943 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 C16orf96A6NNT2 1141 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 PDXKO00764 312 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 ALDH1A1P00352 501 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 GRIK1P39086 918 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 PDAP1Q13442 181 aaKnown RBP12.16□□□□□ -0.46
VCL-202ENST00000372755 CPSF1Q10570 1443 aaKnown RBP12.16□□□□□ -0.46
VCL-202ENST00000372755 MRPL28Q13084 256 aaKnown RBP12.16□□□□□ -0.46
VCL-202ENST00000372755 LRRC14Q15048 493 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.16□□□□□ -0.461e-10■■■■■ 87.1
VCL-202ENST00000372755 ARL8AQ96BM9 186 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 OSBPL1AQ9BXW6 950 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 FAM129AQ9BZQ8 928 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 YIPF3Q9GZM5 350 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 MRGBPQ9NV56 204 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 AURKCQ9UQB9 309 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 ZC3H4Q9UPT8 1303 aaKnown RBP12.16□□□□□ -0.46
VCL-202ENST00000372755 METP08581 1390 aa12.16□□□□□ -0.46
VCL-202ENST00000372755 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
VCL-202ENST00000372755 F5H6K3 240 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 TLR2O60603 784 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 ST8SIA6P61647 398 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 KLRC3Q07444 240 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 AARS2Q5JTZ9 985 aaKnown RBP12.15□□□□□ -0.46
VCL-202ENST00000372755 KRT35Q92764 455 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 FAM32AQ9Y421 112 aaKnown RBP12.15□□□□□ -0.46
VCL-202ENST00000372755 ESYT3A0FGR9 886 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 DEAF1O75398 565 aaPredicted RBP12.15□□□□□ -0.46
VCL-202ENST00000372755 DAB1O75553 588 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 PRKCBP05771 671 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 ADRA2BP18089 450 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 CDC27P30260 824 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 CARSP49589 748 aaKnown RBP12.15□□□□□ -0.46
VCL-202ENST00000372755 SERPINB9P50453 376 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 FAM182BQ5T319 152 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 OTULINQ96BN8 352 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 TTC26A0AVF1 554 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 KRT87PA6NCN2 255 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 AGTP01019 485 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 CYP2C19P33261 490 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 PGM1P36871 562 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 MAP3K7CLP57077 242 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 SNX17Q15036 470 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 TRABDQ9H4I3 376 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 EHD2Q9NZN4 543 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 COPG1Q9Y678 874 aaKnown RBP12.15□□□□□ -0.46
VCL-202ENST00000372755 SAMD9Q5K651 1589 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 SKOR1P84550 965 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 SPP2Q13103 211 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 KCNB1Q14721 858 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 P3H1Q32P28 736 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 SPATA21Q7Z572 469 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 RNPC3Q96LT9 517 aaKnown RBP12.15□□□□□ -0.46
VCL-202ENST00000372755 PPCSQ9HAB8 311 aa12.15□□□□□ -0.46
VCL-202ENST00000372755 MEFVO15553 781 aaPredicted RBP12.15□□□□□ -0.47
VCL-202ENST00000372755 KCNN4O15554 427 aa12.15□□□□□ -0.47
VCL-202ENST00000372755 TRIM49P0CI25 452 aa12.15□□□□□ -0.47
VCL-202ENST00000372755 TRIM49CP0CI26 452 aa12.15□□□□□ -0.47
VCL-202ENST00000372755 APPL2Q8NEU8 664 aa12.15□□□□□ -0.47
VCL-202ENST00000372755 NSMCE4AQ9NXX6 385 aa12.15□□□□□ -0.47
VCL-202ENST00000372755 HERC5Q9UII4 1024 aaKnown RBP12.15□□□□□ -0.47
VCL-202ENST00000372755 KCNH4Q9UQ05 1017 aa12.15□□□□□ -0.47
VCL-202ENST00000372755 NMT2O60551 498 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 ASMTLO95671 621 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 SCP2P22307 547 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 TRPC1P48995 793 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 CEP55Q53EZ4 464 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 MED15Q96RN5 788 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 SRPK1Q96SB4 655 aaKnown RBP12.14□□□□□ -0.47
VCL-202ENST00000372755 CPVLQ9H3G5 476 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 MAGI2Q86UL8 1455 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 STXBP3O00186 592 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 KHDRBS2Q5VWX1 349 aaKnown RBP12.14□□□□□ -0.47
VCL-202ENST00000372755 SYNE4Q8N205 404 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 C18orf8Q96DM3 657 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 UVRAGQ9P2Y5 699 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 SLC26A4O43511 780 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 YWHABP31946 246 aaKnown RBP12.14□□□□□ -0.47
VCL-202ENST00000372755 RBP5P82980 135 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 HLFQ16534 295 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 DNAL1Q4LDG9 190 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms