RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ZNF571Q7Z3V5 609 aaPredicted RBP15.23■□□□□ 0.03
LDB3-204ENST00000372066 CREG2Q8IUH2 290 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 NOA1Q8NC60 698 aaKnown RBP15.23■□□□□ 0.03
LDB3-204ENST00000372066 MCPH1Q8NEM0 835 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 OR6J1Q8NGC5 347 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 SCLYQ96I15 445 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 PNKPQ96T60 521 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 FUT8Q9BYC5 575 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 INTS2Q9H0H0 1204 aaKnown RBP15.23■□□□□ 0.03
LDB3-204ENST00000372066 WNT8AQ9H1J5 351 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 POLD4Q9HCU8 107 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 APEX2Q9UBZ4 518 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 ADAMTS1Q9UHI8 967 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 NAGPAQ9UK23 515 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 USP20Q9Y2K6 914 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 PRUNE2Q8WUY3 3088 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 LRRC37A2A6NM11 1700 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 VCANP13611 3396 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 LOC102724159A0A0B4J2E5 919 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 RBM47A0AV96 593 aaKnown RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 GRID2IPA4D2P6 1211 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 ZBBXA8MT70 800 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 F8VZ95 297 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 MAP2K7O14733 419 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 SRGAP2O75044 1071 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 EIF3JO75822 258 aaKnown RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 SEC31AO94979 1220 aaKnown RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 RHOXF2BP0C7M4 288 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 CYP2C9P11712 490 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 CPT1AP50416 773 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 VAMP7P51809 220 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 NAP1L1P55209 391 aaKnown RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 APBA1Q02410 837 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 ARID5AQ03989 594 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 DMP1Q13316 513 aaPredicted RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 PWP2Q15269 919 aaKnown RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 CCDC85BQ15834 202 aaPredicted RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 BEND6Q5SZJ8 279 aaPredicted RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 CCDC181Q5TID7 509 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 KCNN1Q92952 543 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 CAPZA3Q96KX2 299 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 CALR3Q96L12 384 aaKnown RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 MPHOSPH6Q99547 160 aaKnown RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 RHOXF2Q9BQY4 288 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 ACBD3Q9H3P7 528 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 TRMT13Q9NUP7 481 aaKnown RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 YBX2Q9Y2T7 364 aaKnown RBP15.22■□□□□ 0.03
LDB3-204ENST00000372066 SLC4A7Q9Y6M7 1214 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 MCM3APO60318 1980 aa15.22■□□□□ 0.03
LDB3-204ENST00000372066 DGAT1O75907 488 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 KLRC1P26715 233 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 ICAM3P32942 547 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 RABGGTBP53611 331 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 NPEPPSP55786 919 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 PURAQ00577 322 aaKnown RBP15.21■□□□□ 0.03
LDB3-204ENST00000372066 ADGRE1Q14246 886 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 BRDTQ58F21 947 aaPredicted RBP15.21■□□□□ 0.03
LDB3-204ENST00000372066 FAM47CQ5HY64 1035 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 ALKBH5Q6P6C2 394 aaKnown RBP15.21■□□□□ 0.03
LDB3-204ENST00000372066 USP37Q86T82 979 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 MAP4K3Q8IVH8 894 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 KSR1Q8IVT5 923 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 LMBR1Q8WVP7 490 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 NTPCRQ9BSD7 190 aaKnown RBP15.21■□□□□ 0.03
LDB3-204ENST00000372066 MTG1Q9BT17 334 aaPredicted RBP15.21■□□□□ 0.03
LDB3-204ENST00000372066 TLR10Q9BXR5 811 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 JPH1Q9HDC5 661 aaPredicted RBP15.21■□□□□ 0.03
LDB3-204ENST00000372066 SLC9A2Q9UBY0 812 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 DNAJC12Q9UKB3 198 aa15.21■□□□□ 0.03
LDB3-204ENST00000372066 SPATA31C2B4DYI2 1134 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 H2AFZP0C0S5 128 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 PLA2G4AP47712 749 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 VSNL1P62760 191 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 CBWD6Q4V339 395 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 GLE1Q53GS7 698 aaKnown RBP15.2■□□□□ 0.02
LDB3-204ENST00000372066 CBWD3Q5JTY5 395 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 CBWD5Q5RIA9 395 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 FAM102BQ5T8I3 360 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 MEI1Q5TIA1 1274 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 MIS18BP1Q6P0N0 1132 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 H2AFVQ71UI9 128 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 UBXN6Q9BZV1 441 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 HSPBP1Q9NZL4 362 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 SALL4Q9UJQ4 1053 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 IGSF9BQ9UPX0 1349 aa15.2■□□□□ 0.02
LDB3-204ENST00000372066 BUB1O43683 1085 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 PALMO75781 387 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 TRIM49P0CI25 452 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 TRIM49CP0CI26 452 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 PEX3P56589 373 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 DRAP1Q14919 205 aaPredicted RBP15.19■□□□□ 0.02
LDB3-204ENST00000372066 STXBP2Q15833 593 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 NBPF20Q3BBV1 942 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 CFAP221Q4G0U5 840 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 ANO5Q75V66 913 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 MAEAQ7L5Y9 396 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 DEFB128Q7Z7B8 93 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 SYCE1Q8N0S2 351 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 TMEM161BQ8NDZ6 487 aa15.19■□□□□ 0.02
LDB3-204ENST00000372066 SCFD2Q8WU76 684 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms