RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CTNND1O60716 968 aaKnown RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 TNFRSF21O75509 655 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 TMCC1O94876 653 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 PRKAR2BP31323 418 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 DSG3P32926 999 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 TCF7P36402 384 aaPredicted RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 IL1RL1Q01638 556 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 NR1H3Q13133 447 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 SMAD1Q15797 465 aaKnown RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 EPHA10Q5JZY3 1008 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CREB3L3Q68CJ9 461 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 FAM173BQ6P4H8 233 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 FOXR1Q6PIV2 292 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 KDELC1Q6UW63 502 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 COPS6Q7L5N1 327 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 SYTL1Q8IYJ3 562 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 ANKRD35Q8N283 1001 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 SPIRE2Q8WWL2 714 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 LRGUKQ96M69 825 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 WDR24Q96S15 920 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 MPHOSPH8Q99549 860 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CRB3Q9BUF7 120 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 WDR18Q9BV38 432 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 MRPL46Q9H2W6 279 aaKnown RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 VCX3BQ9H321 246 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 SYNCQ9H7C4 482 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 GPR108Q9NPR9 543 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 MTRRQ9UBK8 725 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 ZBTB21Q9ULJ3 1066 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 STRIP2Q9ULQ0 834 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 ZSCAN5CA6NGD5 496 aaPredicted RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 TISP43B9A030 160 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 B9A039 149 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 H3BRJ5 948 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 M0R3H8 397 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 HOXC11O43248 304 aaPredicted RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 HSPA4LO95757 839 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 ATP6V1B1P15313 513 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 SLC16A2P36021 539 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 NBL1P41271 181 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 TUFMP49411 452 aaKnown RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CCNG1P51959 295 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 FPGSQ05932 587 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 FUT2Q10981 343 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 KCNH2Q12809 1159 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 SNW1Q13573 536 aaKnown RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CBX2Q14781 532 aaPredicted RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 SUZ12Q15022 739 aaKnown RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CFAP100Q494V2 611 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CCDC14Q49A88 953 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CCDC40Q4G0X9 1142 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 EMC10Q5UCC4 262 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 TOGARAM2Q6ZUX3 1019 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 BZW1Q7L1Q6 419 aaKnown RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 LPCAT2Q7L5N7 544 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 LRRTM3Q86VH5 581 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 RASEFQ8IZ41 740 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 SCYL3Q8IZE3 742 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 SIX5Q8N196 739 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CBARPQ8N350 705 aaPredicted RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 KCTD13Q8WZ19 329 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CELF1Q92879 486 aaKnown RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CGREF1Q99674 301 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 PLVAPQ9BX97 442 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 COPRSQ9NQ92 184 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 IL20Q9NYY1 176 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 IFT80Q9P2H3 777 aaPredicted RBP5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CTNNAL1Q9UBT7 734 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 CAPN7Q9Y6W3 813 aa5.45□□□□□ -1.54
UBE3D-202ENST00000369746 ASTN2O75129 1339 aaPredicted RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 GPR75-ASB3A0A0A6YYF3 556 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ABHD14A-ACY1A0A1B0GW23 586 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ZBBXA8MT70 800 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 MAP3K6O95382 1288 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 EOMESO95936 686 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ZKSCAN1P17029 563 aaPredicted RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ENDOUP21128 410 aaKnown RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 CTGFP29279 349 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 S100A5P33763 92 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 TXLNAP40222 546 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 RTP1P59025 263 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ARPC4P59998 168 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ETF1P62495 437 aaKnown RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 BYSLQ13895 437 aaKnown RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 LRRC26Q2I0M4 334 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 HERC4Q5GLZ8 1057 aaPredicted RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 HECTD3Q5T447 861 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ITPRIPL1Q6GPH6 555 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 TATDN1Q6P1N9 297 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 SLC39A5Q6ZMH5 540 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ESX1Q8N693 406 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 CFAP61Q8NHU2 1237 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 GPRASP2Q96D09 838 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 C12orf42Q96LP6 360 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 TRAPPC9Q96Q05 1148 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 UQCC2Q9BRT2 126 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 EDEM3Q9BZQ6 932 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 FOXP3Q9BZS1 431 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 MTMR12Q9C0I1 747 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms